Detailed information of deep learning profile BP000490.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000490.1
Cell line/tissue: liver
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR847DIT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 0.00 0.02 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.04 0.00 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.01 0.00 0.02 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1073 1091 1081 1032 1074 1043 996 972 1042 1050 1000 998 994 1078 1083 985 1094 1152 1217 1189 1681 736 1 4376 1 4 157 0 294 525 918 992 788 941 1066 967 1030 1107 981 1079 1035 1019 1040 1094 1015 1068 1013 1046 1005 1048 ]
C [ 1135 1087 1122 1182 1194 1115 1132 1205 1185 1134 1217 1236 1171 1107 1211 1341 1216 1177 1161 936 601 2067 4391 0 2 0 52 1 1906 1687 1322 971 1139 1085 1009 1154 1198 1153 1163 1116 1147 1138 1128 1117 1185 1157 1151 1143 1128 1084 ]
G [ 1168 1122 1141 1141 1142 1146 1148 1171 1055 1187 1097 1138 1168 1190 1167 1098 1125 1197 1119 1335 1585 1468 0 8 137 4387 0 4368 1480 434 782 1272 1334 1338 1329 1243 1086 1112 1213 1177 1134 1179 1202 1150 1115 1118 1167 1182 1227 1209 ]
T [ 1016 1092 1048 1037 982 1088 1116 1044 1110 1021 1078 1020 1059 1017 931 968 957 866 895 932 525 121 0 8 4252 1 4183 23 712 1746 1370 1157 1131 1028 988 1028 1078 1020 1035 1020 1076 1056 1022 1031 1077 1049 1061 1021 1032 1051 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 0.00 0.00 -0.01 0.02 -0.03 0.00 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.00 0.01 0.00 0.01 0.04 -0.02 0.04 -0.01 0.02 -0.02 0.01 0.01 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.02 0.01 -0.02 0.04 -0.02 0.03 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.02 -0.02 0.01 -0.03 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4565

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3835

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2463

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1908

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1524

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 568

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 526

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 324

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 322

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 320

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 123

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 52

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 48

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages