Detailed information of deep learning profile BP000485.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000485.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000FAE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.08 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.10 0.00 0.13 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.11 0.00 0.11 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.09 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 500 512 540 490 495 540 487 506 495 507 461 485 493 508 484 517 455 543 545 565 666 290 27 2506 0 7 22 0 521 233 295 475 457 490 474 520 462 506 491 488 459 508 512 543 524 495 483 499 486 484 ]
C [ 879 759 780 803 809 805 782 801 788 756 838 815 868 896 818 785 816 811 751 621 523 1356 2593 0 2623 0 1 2 738 892 1089 858 835 751 789 829 777 742 792 766 882 793 821 770 765 763 798 779 813 779 ]
G [ 773 810 787 786 813 768 810 817 807 882 828 796 775 749 830 843 857 866 785 1007 1070 374 3 29 0 2616 0 2616 822 656 637 781 849 892 898 768 828 886 821 915 781 819 773 832 813 857 863 824 807 838 ]
T [ 471 542 516 544 506 510 544 499 533 478 496 527 487 470 491 478 495 403 542 430 364 603 0 88 0 0 2600 5 542 842 602 509 482 490 462 506 556 489 519 454 501 503 517 478 521 508 479 521 517 522 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.02 -0.00 -0.02 0.09 -0.09 0.03 -0.02 -0.06 0.00 -0.01 0.00 -0.00 ]
C [ 0.01 0.00 -0.01 0.01 0.10 -0.10 0.13 -0.10 0.04 -0.07 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.02 0.01 -0.06 0.03 -0.09 0.11 -0.10 0.11 0.01 -0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.02 0.00 -0.06 -0.02 0.03 -0.10 0.09 -0.02 -0.00 0.02 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 959

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 365

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 107

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages