Detailed information of deep learning profile BP000484.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000484.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EZF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.00 0.06 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.08 0.00 0.09 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.08 -0.00 0.07 0.01 -0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.06 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 529 496 522 484 440 501 517 469 510 507 541 506 516 477 506 503 617 604 414 11 2144 1 7 74 13 356 361 395 480 397 472 504 474 413 474 495 470 478 525 454 484 495 492 464 491 511 487 478 464 468 ]
C [ 546 585 581 545 573 594 568 573 547 570 588 573 558 612 607 556 421 325 811 2207 0 2223 1 79 28 458 743 699 523 567 554 532 574 585 551 574 568 648 589 600 609 598 579 609 605 612 585 564 620 619 ]
G [ 702 632 647 680 700 644 693 683 648 646 619 707 683 660 685 711 741 957 615 2 45 0 2217 2 2085 1137 452 567 710 744 736 719 717 751 731 677 746 631 624 659 639 635 668 646 604 629 662 670 630 640 ]
T [ 449 513 476 517 513 487 448 501 521 503 478 440 469 477 428 456 447 340 386 6 37 2 1 2071 100 275 670 565 513 518 464 471 461 477 470 480 442 469 488 513 494 498 487 507 526 474 492 514 512 499 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 -0.00 0.00 0.06 -0.05 0.03 -0.01 -0.04 -0.00 -0.00 0.00 0.00 ]
C [ 0.01 0.01 -0.00 0.01 0.08 -0.08 0.09 -0.08 0.04 -0.04 0.02 0.02 0.01 0.01 ]
G [ 0.01 0.00 0.02 0.01 -0.05 0.03 -0.08 0.08 -0.08 0.07 0.01 -0.00 0.00 0.01 ]
T [ 0.00 0.00 -0.01 -0.00 -0.04 -0.01 0.04 -0.06 0.06 -0.00 -0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3917

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1479

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 801

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 465

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 310

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 78

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 74

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
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