Detailed information of deep learning profile BP000483.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000483.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EUP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 -0.00 0.00 0.06 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.10 0.00 0.09 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.09 0.00 0.09 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.05 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 473 480 468 483 466 448 478 449 470 494 481 524 498 466 492 446 468 566 880 362 3 2154 0 0 159 6 274 300 371 475 419 497 462 475 462 499 521 488 480 497 512 514 488 499 465 466 463 476 440 476 ]
C [ 608 614 599 592 648 637 624 625 610 597 623 658 591 635 654 687 559 581 390 489 2213 0 2216 0 117 4 247 981 729 574 696 617 661 702 587 589 576 623 646 610 626 614 631 603 649 599 664 560 612 620 ]
G [ 635 631 649 626 612 625 622 679 659 596 648 589 649 628 613 670 671 725 620 1069 0 44 0 2216 0 2144 1387 316 526 669 628 647 697 569 691 649 647 665 617 639 597 654 677 638 593 676 595 694 659 643 ]
T [ 500 491 500 515 490 506 492 463 477 529 464 445 478 487 457 413 518 344 326 296 0 18 0 0 1940 62 308 619 590 498 473 455 396 470 476 479 472 440 473 470 481 434 420 476 509 475 494 486 505 477 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 -0.01 -0.01 0.06 -0.08 0.02 -0.02 -0.05 -0.01 -0.02 -0.00 -0.00 ]
C [ 0.00 0.01 -0.01 0.01 0.10 -0.09 0.09 -0.05 0.03 -0.06 0.02 0.02 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.02 -0.06 0.03 -0.05 0.09 -0.09 0.09 0.02 -0.01 0.01 0.00 ]
T [ -0.00 -0.01 -0.02 -0.02 -0.05 -0.02 0.02 -0.08 0.06 -0.01 -0.01 0.02 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1829

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 550

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 157

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 128

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 119

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 113

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages