Detailed information of deep learning profile BP000482.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in NB4 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000482.1
Cell line/tissue: NB4
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EHS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 -0.00 0.06 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.09 0.00 0.05 0.00 0.00 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.10 0.00 0.08 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 0.00 0.05 0.00 -0.00 0.01 0.00 0.00 ]

Frequency matrix

       
A [ 3992 3823 3989 3915 3826 3771 3885 3628 3832 3715 3860 3653 3763 3867 4058 3791 3782 3923 4061 4113 4516 5776 3557 50 16086 4 13 643 20 3026 2114 3002 4032 3472 3545 3731 3672 3553 3854 3835 3869 3758 3877 4065 4088 3883 3890 3868 3992 3772 ]
C [ 4431 4623 4420 4461 4445 4484 4316 4360 4239 4375 4402 4547 4624 4588 4407 4245 4565 4518 4316 4038 3539 3076 7180 16348 16 7887 1 1303 69 4885 6157 5258 4012 4588 4549 4176 4440 4339 4216 4150 4351 4697 4471 4366 4176 4344 4289 4397 4287 4365 ]
G [ 4211 4094 4206 4131 4306 4213 4296 4166 4359 4378 4588 4224 4104 4075 4262 4703 4368 4122 4641 4316 5201 5677 4123 19 136 10 16410 19 15859 6199 2000 2798 3984 4375 4480 4510 4440 4552 4447 4523 4462 4041 4160 4182 4198 4252 4309 4221 4260 4155 ]
T [ 3790 3884 3809 3917 3847 3956 3927 4270 3994 3956 3574 4000 3933 3894 3697 3685 3709 3861 3406 3957 3168 1895 1564 7 186 8523 0 14459 476 2314 6153 5366 4396 3989 3850 4007 3872 3980 3907 3916 3742 3928 3916 3811 3962 3945 3936 3938 3885 4132 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.02 0.01 -0.01 0.06 -0.07 0.04 -0.02 -0.04 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.09 -0.06 0.09 -0.06 0.04 -0.04 0.02 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.02 -0.04 0.03 -0.07 0.10 -0.06 0.08 0.02 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.02 -0.01 -0.04 -0.02 0.04 -0.07 0.06 -0.00 0.00 0.02 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 7067

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5378

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 3251

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1921

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 514

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 317

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 151

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 125

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 81

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 70

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 26

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages