Search profile(s)

  1. Home
  2. Search

128 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA0923.2 lim-4 Caenorhabditis elegans
 C2H2 HD-LIM
MA0924.1 pal-1 Caenorhabditis elegans
 Homeo HOX
MA0925.1 sma-4 Caenorhabditis elegans
 SMAD/NF-1 SMAD
MA0925.2 sma-4 Caenorhabditis elegans
 SMAD/NF-1 SMAD
MA0926.1 unc-86 Caenorhabditis elegans
 Homeo POU
MA0927.1 vab-7 Caenorhabditis elegans
 Homeo HOX
MA0928.1 zfh-2 Caenorhabditis elegans
 Homeo HD-ZF
MA0928.2 zfh-2 Caenorhabditis elegans
 Homeo HD-ZF
MA1438.1 atf-7 Caenorhabditis briggsae
 Basic Jun-related
MA1438.2 atf-7 Caenorhabditis briggsae
 Basic Jun-related
Showing 10 profiles of page 4 from 13 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.