Detailed information of matrix profile UN0701.1

  1. Home
  2. Matrix > UN0701.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: egl-5
Matrix ID: UN0701.1
Class: Homeo domain factors
Family: HOX
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: Misc
Validation:
Uniprot ID: P17486  
Source: 20513432
Comment:

Sequence logo

Frequency matrix

         
A [ 123 91 123 942 135 228 764 844 695 165 ]
C [ 659 702 852 22 15 95 105 83 57 216 ]
G [ 184 53 7 20 13 23 27 20 23 14 ]
T [ 34 154 18 16 837 654 104 53 225 605 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0701.1 UN0701 1 egl-5 Caenorhabditis elegans
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: