Detailed information of matrix profile UN0470.1

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Profile summary

Name: Srf
Matrix ID: UN0470.1
Class: MADS box factors
Family: Regulators of differentiation
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2R3  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 254 274 240 312 261 212 273 39 24 810 84 850 93 497 248 222 133 288 255 321 ]
C [ 233 229 254 251 207 271 253 905 899 41 24 31 62 101 190 68 130 292 304 239 ]
G [ 252 248 235 221 219 262 235 31 14 51 12 53 26 146 196 643 581 188 209 195 ]
T [ 261 249 271 216 313 254 239 25 63 98 880 66 819 257 366 67 157 232 232 244 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0470.1 UN0470 1 Srf Ciona intestinalis
Regulators of differentiation MADS box factors
UN0470.2 UN0470 2 Srf Ciona intestinalis
Regulators of differentiation MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: