Detailed information of matrix profile MA1930.2

Profile summary

Name: CTCF
Matrix ID: MA1930.2
Class: C2H2
Family: More
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 34326481
Uniprot ID: P49711  
Source: ReMap
Comment: TF

Sequence logo

Frequency matrix

A [ 250 230 322 202 28 1128 23 8 131 1037 79 298 14 169 430 517 950 587 742 932 410 415 445 531 462 1014 1961 309 308 336 24 2083 386 ]
C [ 740 1161 86 2117 2472 1208 1399 2527 212 175 961 275 9 155 1242 1041 393 494 541 376 561 770 623 419 328 892 179 1456 155 25 2476 144 400 ]
G [ 1307 164 1833 138 14 71 14 9 54 1016 1409 97 2515 2074 300 458 781 902 730 604 1138 855 794 1129 1333 324 278 366 127 2129 35 107 1497 ]
T [ 279 1021 335 119 62 169 1140 32 2179 348 127 1906 38 178 604 560 452 593 563 664 467 536 714 497 453 346 158 445 1986 86 41 242 293 ]

Binding sites information

External links