Detailed information of matrix profile MA0870.1

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Profile summary
Name: Sox1
Matrix ID: MA0870.1
Class: High-mobility
Family: SOX-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 12920151
Uniprot ID: P53783  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 1369 2316 0 2316 2316 13 1682 782 4 2316 0 0 0 79 222 ]
C [ 396 51 2316 12 325 0 5 508 2316 0 0 14 0 260 329 ]
G [ 356 36 0 0 0 0 359 525 51 0 244 0 2316 58 265 ]
T [ 195 85 0 7 0 2316 634 502 33 0 2316 2316 0 2316 1499 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0870.1 MA0870 1 Sox1 Mus musculus
SOX-related High-mobility
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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