Summary information of deep learning profile DL0001.1

This page shows the summary of all deep learning-derived profiles and motifs for CTCF. Please scroll down the page to browse individual datasets.

Profile summary

Name: CTCF
Profile ID: DL0001.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1929.2 MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCODE
Number of datasets: 448
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.06 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 ]
C [ 0.00 0.01 0.01 -0.00 0.08 0.15 0.00 0.05 0.02 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.08 0.00 0.03 0.01 0.00 0.00 ]
G [ 0.00 -0.00 0.01 0.02 -0.00 -0.00 0.01 0.01 -0.00 0.00 0.16 0.07 0.05 0.14 0.09 0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ 0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.01 ]
No common motifs identified for DL0001.1.

448 models found for CTCF

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000201.1 CTCF ENCSR259PNW middle frontal area 46 Homo sapiens MA0139.2
BP000202.1 CTCF ENCSR260FAS neural progenitor cell Homo sapiens MA0139.2
BP000203.1 CTCF ENCSR261VAS smooth muscle cell Homo sapiens MA0139.2
BP000204.1 CTCF ENCSR265ARE VCaP Homo sapiens MA0139.2
BP000205.1 CTCF ENCSR265PFQ body of pancreas Homo sapiens MA0139.2
BP000206.1 CTCF ENCSR266CJT spleen Homo sapiens MA0139.2
BP000207.1 CTCF ENCSR266UTR esophagus squamous epithelium Homo sapiens MA0139.2
BP000208.1 CTCF ENCSR266ZUX nephron Homo sapiens MA0139.2
BP000209.1 CTCF ENCSR270KFY middle frontal area 46 Homo sapiens MA0139.2
BP000210.1 CTCF ENCSR275JVX middle frontal area 46 Homo sapiens MA0139.2
Showing 10 profiles of page 21 from 45 pages