Detailed information of deep learning profile BP001383.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF41 in K562 using a single trained BPNet model.

Model details

Name: ZNF41
Model ID: BP001383.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0814.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P51814  
Source: ENCSR235PYI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.02 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 0.00 0.01 -0.00 0.01 0.00 0.01 0.00 0.02 0.00 0.01 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.02 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 0.01 0.00 0.00 0.02 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 66 56 55 61 46 81 54 73 36 36 46 98 20 45 20 219 7 15 29 9 52 76 39 53 54 90 36 62 56 47 59 64 58 86 66 69 62 62 72 63 68 65 75 90 96 77 64 66 66 73 ]
C [ 70 45 144 55 45 46 145 43 156 27 143 107 280 33 212 23 48 8 22 46 47 86 140 48 61 71 99 58 129 143 117 80 102 61 70 90 63 72 81 81 74 67 89 71 72 83 75 61 81 85 ]
G [ 72 153 63 51 170 136 48 65 78 26 40 90 11 21 14 70 12 274 250 13 163 79 53 71 82 79 54 50 55 56 64 53 86 80 93 80 87 96 77 71 69 101 74 72 76 71 86 99 86 71 ]
T [ 124 78 70 165 71 69 85 151 62 243 103 37 21 233 86 20 265 35 31 264 70 91 100 160 135 92 143 162 92 86 92 135 86 105 103 93 120 102 102 117 121 99 94 99 88 101 107 106 99 103 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.01 0.00 -0.01 -0.01 -0.01 0.02 -0.01 -0.01 -0.00 -0.02 -0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 -0.00 -0.00 -0.00 0.01 -0.00 0.01 -0.01 0.01 0.01 0.02 -0.00 0.01 -0.01 0.01 -0.00 -0.01 0.00 0.00 0.00 0.01 -0.00 0.00 -0.00 0.01 -0.00 0.01 0.01 0.01 0.00 0.00 -0.00 ]
G [ -0.00 -0.00 0.01 0.01 -0.00 0.00 0.00 -0.00 -0.01 0.01 -0.00 -0.00 -0.01 0.01 -0.01 0.02 0.02 -0.01 0.01 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 0.01 -0.00 0.00 -0.00 0.00 -0.00 0.01 0.00 -0.01 -0.00 0.01 0.01 -0.01 0.02 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1735

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 736

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 137

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 57

CWM

PFM

     

HCWM