Detailed information of deep learning profile BP001383.1

  1. Home
  2. Deep Learning Profile > BP001383.1
This page shows detailed deep learning-derived predictions and motifs for ZNF41 in K562 using a single trained BPNet model.

Model details

Name: ZNF41
Model ID: BP001383.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0814.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P51814  
Source: ENCSR235PYI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.02 0.00 0.00 0.01 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.02 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.01 0.00 0.02 0.00 0.01 0.00 0.01 -0.00 0.01 0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 103 99 106 107 101 88 99 94 99 121 117 102 102 120 93 103 105 86 135 92 86 92 162 143 92 135 160 100 91 70 264 31 35 265 20 86 233 21 37 103 243 62 151 85 69 71 165 70 78 124 ]
C [ 71 86 99 86 71 76 72 74 101 69 71 77 96 87 80 93 80 86 53 64 56 55 50 54 79 82 71 53 79 163 13 250 274 12 70 14 21 11 90 40 26 78 65 48 136 170 51 63 153 72 ]
G [ 85 81 61 75 83 72 71 89 67 74 81 81 72 63 90 70 61 102 80 117 143 129 58 99 71 61 48 140 86 47 46 22 8 48 23 212 33 280 107 143 27 156 43 145 46 45 55 144 45 70 ]
T [ 73 66 66 64 77 96 90 75 65 68 63 72 62 62 69 66 86 58 64 59 47 56 62 36 90 54 53 39 76 52 9 29 15 7 219 20 45 20 98 46 36 36 73 54 81 46 61 55 56 66 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.02 -0.01 0.01 0.01 -0.00 -0.01 0.00 0.01 -0.00 0.00 -0.00 0.00 -0.00 0.01 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.01 -0.01 0.02 0.02 -0.01 0.01 -0.01 -0.00 -0.00 0.01 -0.01 -0.00 0.00 0.00 -0.00 0.01 0.01 -0.00 -0.00 ]
G [ -0.00 0.00 0.00 0.01 0.01 0.01 -0.00 0.01 -0.00 0.00 -0.00 0.01 0.00 0.00 0.00 -0.01 -0.00 0.01 -0.01 0.01 -0.00 0.02 0.01 0.01 -0.01 0.01 -0.00 0.01 -0.00 -0.00 -0.00 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.02 -0.00 -0.01 -0.01 0.02 -0.01 -0.01 -0.01 0.00 -0.01 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1735

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 736

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 137

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 57

CWM

PFM

     

HCWM