Detailed information of deep learning profile BP001380.1

This page shows detailed deep learning-derived predictions and motifs for ZNF444 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF444
Model ID: BP001380.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0191.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8N0Y2  
Source: ENCSR038XIA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.01 0.01 0.01 0.00 0.02 0.02 0.02 0.02 0.02 0.00 0.02 0.02 0.01 0.01 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 320 318 388 439 301 313 362 330 320 322 449 326 353 277 394 260 238 243 495 22 51 24 6 6 1322 61 17 124 78 357 601 239 232 345 350 323 339 472 321 351 330 321 337 308 443 316 290 314 321 293 ]
C [ 340 411 324 309 331 354 436 326 308 421 311 332 418 298 289 214 173 292 173 16 30 55 3 1 110 16 35 26 43 351 182 313 342 309 246 418 409 249 312 294 298 413 386 426 315 311 327 456 326 339 ]
G [ 626 555 560 542 644 649 495 618 659 545 529 621 482 720 635 888 942 762 357 1466 1425 1420 1496 1498 32 1405 1449 1333 1363 660 565 734 772 671 709 564 569 565 582 556 682 573 508 559 513 657 652 501 501 498 ]
T [ 221 223 235 217 231 191 214 233 220 219 218 228 254 212 189 145 154 210 482 3 1 8 2 2 43 25 6 24 23 139 159 221 161 182 202 202 190 221 292 306 197 200 276 214 236 223 238 236 359 377 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 0.01 -0.00 -0.01 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.01 -0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.01 0.00 0.01 0.01 0.01 0.01 0.02 0.02 0.02 0.02 0.02 0.01 0.02 0.02 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.02 -0.02 -0.02 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10252

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2022

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 427

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 346

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 114

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 30

1 profiles found for the same TF (ZNF444) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001381.1 ZNF444 ENCSR164RIC K562 Homo sapiens UN0191.2
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