Detailed information of deep learning profile BP001380.1

This page shows detailed deep learning-derived predictions and motifs for ZNF444 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF444
Model ID: BP001380.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0191.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8N0Y2  
Source: ENCSR038XIA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.01 0.01 0.02 0.02 0.00 0.02 0.02 0.02 0.02 0.02 0.00 0.01 0.01 0.01 ]
G [ 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 377 359 236 238 223 236 214 276 200 197 306 292 221 190 202 202 182 161 221 159 139 23 24 6 25 43 2 2 8 1 3 482 210 154 145 189 212 254 228 218 219 220 233 214 191 231 217 235 223 221 ]
C [ 498 501 501 652 657 513 559 508 573 682 556 582 565 569 564 709 671 772 734 565 660 1363 1333 1449 1405 32 1498 1496 1420 1425 1466 357 762 942 888 635 720 482 621 529 545 659 618 495 649 644 542 560 555 626 ]
G [ 339 326 456 327 311 315 426 386 413 298 294 312 249 409 418 246 309 342 313 182 351 43 26 35 16 110 1 3 55 30 16 173 292 173 214 289 298 418 332 311 421 308 326 436 354 331 309 324 411 340 ]
T [ 293 321 314 290 316 443 308 337 321 330 351 321 472 339 323 350 345 232 239 601 357 78 124 17 61 1322 6 6 24 51 22 495 243 238 260 394 277 353 326 449 322 320 330 362 313 301 439 388 318 320 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.02 -0.02 -0.02 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.02 0.02 0.01 0.02 0.02 0.02 0.02 0.02 0.01 0.01 0.01 0.01 0.00 0.01 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.01 -0.01 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.01 -0.00 0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10252

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2022

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 427

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 346

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 114

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 30

1 profiles found for the same TF (ZNF444) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001381.1 ZNF444 ENCSR164RIC K562 Homo sapiens UN0191.2
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