Detailed information of deep learning profile BP001378.1

This page shows detailed deep learning-derived predictions and motifs for ZNF416 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF416
Model ID: BP001378.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1979.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8NA42  
Source: ENCSR604CNJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.02 0.01 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.01 0.01 0.00 0.00 -0.00 -0.00 -0.00 0.01 0.01 0.01 0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 0.00 0.01 0.00 0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.02 0.01 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 0.01 -0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.02 0.00 0.01 0.00 0.02 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.01 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.01 ]

Frequency matrix

A [ 24 19 15 19 3 4 15 17 14 29 32 6 28 32 1 2 0 0 0 9 29 0 2 36 22 25 0 34 1 0 0 0 0 1 1 36 2 2 1 2 12 2 13 2 0 1 1 34 3 1 ]
C [ 7 11 15 12 28 27 16 4 5 5 1 3 5 0 2 0 2 2 0 0 3 33 34 0 0 10 0 1 0 35 0 0 0 0 34 0 21 34 31 18 0 1 2 1 33 32 33 0 0 1 ]
G [ 3 2 1 2 1 0 2 14 16 2 1 2 1 0 2 32 1 3 2 19 4 0 0 0 12 0 0 1 0 0 0 36 36 34 1 0 0 0 0 0 13 1 20 32 1 1 1 0 33 1 ]
T [ 2 4 5 3 4 5 3 1 1 0 2 25 2 4 31 2 33 31 34 8 0 3 0 0 2 1 36 0 35 1 36 0 0 1 0 0 13 0 4 16 11 32 1 1 2 2 1 2 0 33 ]

Hypothetical CWM

A [ -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.01 -0.00 0.01 0.00 0.00 -0.01 0.01 0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 0.01 0.01 0.01 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.01 -0.00 0.01 0.01 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.01 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.02 0.02 -0.00 0.00 -0.00 0.00 -0.01 -0.01 0.01 -0.01 0.00 -0.00 0.00 0.02 -0.00 0.01 0.01 0.01 0.00 -0.00 -0.01 -0.00 -0.01 0.01 0.02 0.01 -0.00 -0.00 -0.00 ]
G [ -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 0.01 0.00 0.01 -0.00 -0.00 0.00 -0.00 0.00 -0.01 -0.01 0.00 -0.01 0.00 -0.00 0.01 0.02 0.01 -0.01 -0.00 -0.01 0.00 -0.00 0.00 0.00 -0.00 0.00 0.01 -0.00 0.00 0.01 0.00 0.02 -0.01 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.01 0.01 -0.01 -0.01 0.00 -0.01 -0.01 -0.00 0.01 0.02 -0.00 0.01 0.00 0.02 0.00 -0.01 0.00 0.00 -0.00 -0.00 -0.01 -0.00 -0.00 0.01 0.01 0.00 -0.00 -0.00 0.00 -0.01 -0.01 -0.01 0.01 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 236

1 profiles found for the same TF (ZNF416) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001377.1 ZNF416 ENCSR288NNJ WTC11 Homo sapiens MA1979.2
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