Detailed information of deep learning profile BP001345.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF547 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF547
Model ID: BP001345.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA2334.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IVP9  
Source: ENCSR909TSW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.03 0.05 -0.00 -0.00 0.00 -0.00 0.01 -0.00 0.01 0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 -0.00 0.05 -0.00 -0.00 0.00 0.01 -0.00 0.07 0.00 -0.00 0.04 0.00 0.00 -0.00 0.01 ]
G [ 0.00 -0.00 0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 0.02 0.00 0.00 0.01 -0.00 0.00 0.00 0.00 -0.00 ]
T [ -0.00 0.00 0.00 0.01 -0.00 0.00 0.02 -0.00 0.00 0.01 0.01 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 104 103 104 111 107 111 116 192 98 108 103 102 115 105 114 106 92 160 75 36 10 0 154 434 460 51 1 0 125 237 1 200 119 88 85 102 139 111 76 99 114 123 184 179 105 111 126 176 113 96 ]
C [ 101 95 92 148 101 140 112 89 103 161 96 129 80 84 173 96 169 96 151 29 5 451 17 5 0 168 24 460 163 6 441 180 94 158 180 160 86 73 94 115 101 173 100 93 104 161 117 104 92 103 ]
G [ 79 160 139 80 141 74 108 89 86 83 90 82 126 164 74 87 83 75 53 38 436 0 4 8 0 1 228 0 27 164 2 9 77 41 70 82 110 160 180 61 68 69 74 89 147 63 122 81 91 92 ]
T [ 176 102 125 121 111 135 124 90 173 108 171 147 139 107 99 171 116 129 181 357 9 9 285 13 0 240 207 0 145 53 16 71 170 173 125 116 125 116 110 185 177 95 102 99 104 125 95 99 164 169 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 -0.01 -0.00 -0.02 -0.00 0.03 0.05 0.00 -0.03 -0.03 0.00 0.02 -0.03 0.02 0.01 0.01 -0.00 ]
C [ 0.00 0.01 0.01 0.00 0.02 -0.01 0.05 -0.01 -0.00 -0.01 0.03 0.00 0.07 0.01 -0.02 0.05 0.00 0.01 -0.01 0.02 ]
G [ 0.01 0.01 0.00 0.01 -0.01 0.04 -0.03 0.01 -0.01 0.00 -0.03 0.03 0.00 0.02 0.02 -0.01 0.00 0.01 0.01 0.00 ]
T [ -0.00 0.00 0.01 0.01 0.01 -0.01 0.01 0.02 -0.00 -0.03 0.02 0.02 -0.03 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1104

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 130

CWM

PFM

     

HCWM