Detailed information of deep learning profile BP001345.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF547 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF547
Model ID: BP001345.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA2334.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IVP9  
Source: ENCSR909TSW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.01 0.01 0.00 -0.00 0.02 0.00 -0.00 0.01 0.00 0.00 -0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.02 -0.00 0.00 -0.00 0.00 0.00 0.04 -0.00 0.00 -0.00 0.00 ]
G [ 0.01 -0.00 0.00 0.00 0.04 -0.00 0.00 0.07 -0.00 0.01 0.00 -0.00 -0.00 0.05 -0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.01 -0.00 0.01 -0.00 0.00 -0.00 -0.00 0.05 0.03 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 169 164 99 95 125 104 99 102 95 177 185 110 116 125 116 125 173 170 71 16 53 145 0 207 240 0 13 285 9 9 357 181 129 116 171 99 107 139 147 171 108 173 90 124 135 111 121 125 102 176 ]
C [ 92 91 81 122 63 147 89 74 69 68 61 180 160 110 82 70 41 77 9 2 164 27 0 228 1 0 8 4 0 436 38 53 75 83 87 74 164 126 82 90 83 86 89 108 74 141 80 139 160 79 ]
G [ 103 92 104 117 161 104 93 100 173 101 115 94 73 86 160 180 158 94 180 441 6 163 460 24 168 0 5 17 451 5 29 151 96 169 96 173 84 80 129 96 161 103 89 112 140 101 148 92 95 101 ]
T [ 96 113 176 126 111 105 179 184 123 114 99 76 111 139 102 85 88 119 200 1 237 125 0 1 51 460 434 154 0 10 36 75 160 92 106 114 105 115 102 103 108 98 192 116 111 107 111 104 103 104 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 -0.03 0.02 0.02 -0.03 -0.00 0.02 0.01 -0.01 0.01 0.01 0.01 0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.00 -0.01 0.02 0.02 0.00 0.03 -0.03 0.00 -0.01 0.01 -0.03 0.04 -0.01 0.01 0.00 0.01 0.01 ]
G [ 0.02 -0.01 0.01 0.00 0.05 -0.02 0.01 0.07 0.00 0.03 -0.01 -0.00 -0.01 0.05 -0.01 0.02 0.00 0.01 0.01 0.00 ]
T [ -0.00 0.01 0.01 0.02 -0.03 0.02 0.00 -0.03 -0.03 0.00 0.05 0.03 -0.00 -0.02 -0.00 -0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1104

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 130

CWM

PFM

     

HCWM