Detailed information of deep learning profile BP001344.1

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This page shows detailed deep learning-derived predictions and motifs for OTX2 in WTC11 using a single trained BPNet model.

Model details

Name: OTX2
Model ID: BP001344.1
Cell line/tissue: WTC11
Class: Homeo domain factors
Family: Paired-related HD factors
JASPAR ID: MA0712.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32243  
Source: ENCSR004HEA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.00 0.04 0.04 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.03 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.03 0.00 0.00 0.02 0.00 -0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 691 692 678 710 847 670 612 723 661 658 707 940 772 672 639 605 358 443 45 3014 3021 13 7 57 247 601 609 571 913 839 611 804 799 582 629 639 753 727 655 729 749 648 823 691 684 756 755 726 794 741 ]
C [ 879 812 938 941 783 775 868 843 770 778 769 696 774 698 835 882 1077 1099 3 1 0 4 2969 2366 1374 1063 786 965 735 770 845 880 819 773 800 766 696 677 777 781 840 909 744 722 780 748 722 806 770 741 ]
G [ 690 766 613 671 718 801 826 677 820 758 837 788 751 833 711 570 961 282 1 4 1 440 10 30 391 308 557 645 758 760 839 677 554 791 964 903 883 915 870 794 781 797 638 830 840 805 909 826 741 786 ]
T [ 764 754 795 702 676 778 718 781 773 830 711 600 727 821 839 967 628 1200 2975 5 2 2567 38 571 1012 1052 1072 843 618 655 729 663 852 878 631 716 692 705 722 720 654 670 819 781 720 715 638 666 719 756 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.04 0.04 -0.02 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.02 -0.04 -0.03 -0.03 0.03 0.02 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 -0.01 -0.04 -0.01 -0.01 0.01 -0.02 -0.01 0.00 -0.00 -0.01 0.00 ]
T [ -0.00 0.00 -0.00 0.01 0.03 -0.01 -0.01 0.02 -0.00 0.00 0.00 0.01 0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 74

CWM

PFM

     

HCWM