Detailed information of deep learning profile BP001344.1

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This page shows detailed deep learning-derived predictions and motifs for OTX2 in WTC11 using a single trained BPNet model.

Model details

Name: OTX2
Model ID: BP001344.1
Cell line/tissue: WTC11
Class: Homeo domain factors
Family: Paired-related HD factors
JASPAR ID: MA0712.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32243  
Source: ENCSR004HEA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.02 0.00 0.00 0.03 0.00 -0.00 0.00 0.00 ]
C [ 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.03 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.04 0.04 0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 756 719 666 638 715 720 781 819 670 654 720 722 705 692 716 631 878 852 663 729 655 618 843 1072 1052 1012 571 38 2567 2 5 2975 1200 628 967 839 821 727 600 711 830 773 781 718 778 676 702 795 754 764 ]
C [ 786 741 826 909 805 840 830 638 797 781 794 870 915 883 903 964 791 554 677 839 760 758 645 557 308 391 30 10 440 1 4 1 282 961 570 711 833 751 788 837 758 820 677 826 801 718 671 613 766 690 ]
G [ 741 770 806 722 748 780 722 744 909 840 781 777 677 696 766 800 773 819 880 845 770 735 965 786 1063 1374 2366 2969 4 0 1 3 1099 1077 882 835 698 774 696 769 778 770 843 868 775 783 941 938 812 879 ]
T [ 741 794 726 755 756 684 691 823 648 749 729 655 727 753 639 629 582 799 804 611 839 913 571 609 601 247 57 7 13 3021 3014 45 443 358 605 639 672 772 940 707 658 661 723 612 670 847 710 678 692 691 ]

Hypothetical CWM

   
A [ -0.00 0.01 0.01 0.00 0.00 -0.00 0.02 -0.01 -0.01 0.03 0.01 -0.00 0.00 -0.00 ]
C [ 0.00 -0.01 -0.00 0.00 -0.01 -0.02 0.01 -0.01 -0.01 -0.04 -0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.02 0.03 -0.03 -0.03 -0.04 -0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.02 0.04 0.04 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 74

CWM

PFM

     

HCWM