Detailed information of deep learning profile BP001335.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF76 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF76
Model ID: BP001335.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1716.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36508  
Source: ENCSR072LQF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.02 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 0.01 0.03 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.05 0.05 0.04 -0.00 0.00 0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.01 0.01 -0.00 0.02 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 1650 1593 1598 1577 1517 1567 1592 1542 1485 1493 1538 1494 1432 1389 1563 1537 1159 1395 896 1242 2704 1934 1995 155 1204 3789 486 213 1450 253 22 0 75 6578 3812 2521 1280 1308 1401 2942 1351 1294 1202 1242 1556 1491 1557 1582 1411 1416 ]
C [ 2366 2252 2382 2309 2267 2262 2384 2367 2370 2340 2376 2417 2441 2362 2303 2066 2561 3951 2195 4605 1058 1004 313 186 3148 2716 1800 1435 4634 1871 7 9 2 309 1068 1504 1555 1574 1583 1628 1544 1588 2651 2701 2288 2261 2275 2286 2336 2395 ]
G [ 2702 2772 2726 2765 2918 2919 2855 2768 2841 2829 2813 2814 2942 2915 2805 3448 3118 1598 4418 1230 3463 4377 4360 7506 3381 857 791 3460 1146 26 8085 8108 7961 396 2427 2265 2382 4243 2519 2550 4125 2339 2422 2316 2654 2761 2826 2725 2853 2837 ]
T [ 1403 1504 1415 1470 1419 1373 1290 1444 1425 1459 1394 1396 1306 1455 1450 1070 1283 1177 612 1044 896 806 1453 274 388 759 5044 3013 891 5971 7 4 83 838 814 1831 2904 996 2618 1001 1101 2900 1846 1862 1623 1608 1463 1528 1521 1473 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 0.00 -0.01 0.00 0.02 -0.01 -0.01 0.01 -0.01 -0.02 -0.03 -0.02 0.03 0.01 0.01 -0.00 -0.00 ]
C [ 0.01 -0.00 -0.00 -0.01 -0.01 0.01 0.01 0.01 0.00 0.01 0.03 -0.01 -0.01 -0.03 -0.01 -0.00 -0.00 0.00 0.00 ]
G [ -0.00 0.01 0.01 0.01 0.03 0.01 -0.00 -0.00 0.01 -0.00 -0.03 0.05 0.05 0.04 -0.01 0.00 0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 0.01 -0.00 -0.01 -0.00 0.02 0.02 0.00 0.03 -0.03 -0.03 0.00 0.01 0.00 0.01 0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 352

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 332

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 240

CWM

PFM

     

HCWM