Detailed information of deep learning profile BP001335.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF76 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF76
Model ID: BP001335.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1716.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36508  
Source: ENCSR072LQF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.02 -0.00 0.01 0.01 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.00 -0.00 0.04 0.05 0.05 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.03 0.01 0.00 0.00 -0.00 ]
G [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 ]
T [ -0.00 -0.00 0.00 0.01 0.02 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 -0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 1473 1521 1528 1463 1608 1623 1862 1846 2900 1101 1001 2618 996 2904 1831 814 838 83 4 7 5971 891 3013 5044 759 388 274 1453 806 896 1044 612 1177 1283 1070 1450 1455 1306 1396 1394 1459 1425 1444 1290 1373 1419 1470 1415 1504 1403 ]
C [ 2837 2853 2725 2826 2761 2654 2316 2422 2339 4125 2550 2519 4243 2382 2265 2427 396 7961 8108 8085 26 1146 3460 791 857 3381 7506 4360 4377 3463 1230 4418 1598 3118 3448 2805 2915 2942 2814 2813 2829 2841 2768 2855 2919 2918 2765 2726 2772 2702 ]
G [ 2395 2336 2286 2275 2261 2288 2701 2651 1588 1544 1628 1583 1574 1555 1504 1068 309 2 9 7 1871 4634 1435 1800 2716 3148 186 313 1004 1058 4605 2195 3951 2561 2066 2303 2362 2441 2417 2376 2340 2370 2367 2384 2262 2267 2309 2382 2252 2366 ]
T [ 1416 1411 1582 1557 1491 1556 1242 1202 1294 1351 2942 1401 1308 1280 2521 3812 6578 75 0 22 253 1450 213 486 3789 1204 155 1995 1934 2704 1242 896 1395 1159 1537 1563 1389 1432 1494 1538 1493 1485 1542 1592 1567 1517 1577 1598 1593 1650 ]

Hypothetical CWM

   
A [ -0.00 0.01 0.01 0.00 0.01 0.00 -0.03 -0.03 0.03 0.00 0.02 0.02 -0.00 -0.01 -0.00 0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.00 -0.01 0.04 0.05 0.05 -0.03 -0.00 0.01 -0.00 -0.00 0.01 0.03 0.01 0.01 0.01 -0.00 ]
G [ 0.00 0.00 -0.00 -0.00 -0.01 -0.03 -0.01 -0.01 0.03 0.01 0.00 0.01 0.01 0.01 -0.01 -0.01 -0.00 -0.00 0.01 ]
T [ -0.00 -0.00 0.01 0.01 0.03 -0.02 -0.03 -0.02 -0.01 0.01 -0.01 -0.01 0.02 0.00 -0.01 0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 352

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 332

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 240

CWM

PFM

     

HCWM