Detailed information of deep learning profile BP001328.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF148 in K562 using a single trained BPNet model.

Model details

Name: ZNF148
Model ID: BP001328.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1653.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UQR1  
Source: ENCSR018MSO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.06 0.07 0.06 0.07 0.07 0.00 0.02 0.05 0.03 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2692 2663 2647 2613 2697 2580 2593 2867 2626 2605 2603 2556 2548 2470 2581 2366 2449 2273 2162 2273 20 7 734 8 2 7279 2393 26 381 553 4014 3568 2506 2730 2695 3020 2541 2762 2917 2790 2763 2924 2820 2915 2818 2882 2603 2765 2710 2727 ]
C [ 3291 3182 2909 3187 2921 2980 2937 3008 2808 2863 3012 2967 3248 3156 2691 2434 2396 1831 2119 1321 7 4 28 18 7 2899 41 16 217 247 3959 1938 2488 2656 2802 2800 3070 2847 2622 2948 3089 2892 3158 2938 3065 3094 3062 3146 3220 3202 ]
G [ 4299 4381 4494 4412 4417 4644 4595 4421 4829 4883 4764 4745 4795 4735 5202 5979 5812 6645 5914 2523 12546 12568 11778 12311 12576 201 8030 12530 11647 11380 3005 5244 5990 5327 5145 4776 4926 4714 4889 4636 4576 4622 4385 4405 4561 4382 4547 4422 4297 4318 ]
T [ 2304 2360 2536 2374 2551 2382 2461 2290 2323 2235 2207 2318 1995 2225 2112 1807 1929 1837 2391 6469 13 7 46 249 1 2207 2122 14 341 406 1608 1836 1602 1873 1944 1990 2049 2263 2158 2212 2158 2148 2223 2328 2141 2228 2374 2253 2359 2339 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.01 -0.03 -0.03 -0.01 -0.03 -0.03 0.01 0.00 -0.02 -0.02 -0.01 0.00 0.01 0.00 ]
C [ 0.01 0.01 0.00 -0.01 -0.01 -0.02 -0.02 -0.03 -0.03 -0.02 -0.00 -0.03 -0.01 -0.00 -0.00 0.01 0.00 0.01 ]
G [ 0.01 0.01 0.02 0.03 0.03 0.06 0.07 0.06 0.07 0.07 0.01 0.04 0.05 0.04 0.03 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.00 0.00 -0.02 -0.03 -0.03 -0.01 -0.02 -0.00 0.01 -0.02 -0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 274

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 248

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 78

CWM

PFM

     

HCWM