Detailed information of deep learning profile BP001328.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF148 in K562 using a single trained BPNet model.

Model details

Name: ZNF148
Model ID: BP001328.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1653.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UQR1  
Source: ENCSR018MSO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.03 0.05 0.02 0.00 0.07 0.07 0.06 0.07 0.06 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2339 2359 2253 2374 2228 2141 2328 2223 2148 2158 2212 2158 2263 2049 1990 1944 1873 1602 1836 1608 406 341 14 2122 2207 1 249 46 7 13 6469 2391 1837 1929 1807 2112 2225 1995 2318 2207 2235 2323 2290 2461 2382 2551 2374 2536 2360 2304 ]
C [ 4318 4297 4422 4547 4382 4561 4405 4385 4622 4576 4636 4889 4714 4926 4776 5145 5327 5990 5244 3005 11380 11647 12530 8030 201 12576 12311 11778 12568 12546 2523 5914 6645 5812 5979 5202 4735 4795 4745 4764 4883 4829 4421 4595 4644 4417 4412 4494 4381 4299 ]
G [ 3202 3220 3146 3062 3094 3065 2938 3158 2892 3089 2948 2622 2847 3070 2800 2802 2656 2488 1938 3959 247 217 16 41 2899 7 18 28 4 7 1321 2119 1831 2396 2434 2691 3156 3248 2967 3012 2863 2808 3008 2937 2980 2921 3187 2909 3182 3291 ]
T [ 2727 2710 2765 2603 2882 2818 2915 2820 2924 2763 2790 2917 2762 2541 3020 2695 2730 2506 3568 4014 553 381 26 2393 7279 2 8 734 7 20 2273 2162 2273 2449 2366 2581 2470 2548 2556 2603 2605 2626 2867 2593 2580 2697 2613 2647 2663 2692 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.02 0.01 -0.00 -0.02 -0.01 -0.03 -0.03 -0.02 0.00 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.03 0.04 0.05 0.04 0.01 0.07 0.07 0.06 0.07 0.06 0.03 0.03 0.02 0.01 0.01 ]
G [ 0.01 0.00 0.01 -0.00 -0.00 -0.01 -0.03 -0.00 -0.02 -0.03 -0.03 -0.02 -0.02 -0.01 -0.01 0.00 0.01 0.01 ]
T [ 0.00 0.01 0.00 -0.01 -0.02 -0.02 0.00 0.01 -0.03 -0.03 -0.01 -0.03 -0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 274

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 248

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 78

CWM

PFM

     

HCWM