Detailed information of deep learning profile BP001324.1

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This page shows detailed deep learning-derived predictions and motifs for OVOL1 in MCF-7 using a single trained BPNet model.

Model details

Name: OVOL1
Model ID: BP001324.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1544.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O14753  
Source: ENCSR829WBA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 0.00 0.00 -0.00 0.07 0.05 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.09 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.06 0.06 -0.00 -0.00 -0.00 -0.00 ]
T [ 0.00 -0.00 0.00 -0.00 0.05 -0.00 -0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1656 1679 1800 1667 1764 1689 1681 1657 1645 1702 1672 1684 1548 1647 1687 2839 2023 2278 389 7045 4867 17 477 0 1552 1949 1737 1523 1563 1714 1648 1859 1671 1625 1787 1576 1692 1675 1599 1663 1683 1730 1759 1663 1777 1754 1649 1732 1667 1668 ]
C [ 1976 1817 1773 1810 1870 1755 1820 1816 1837 1851 1927 1799 1755 1663 1756 955 1602 1859 286 1 9 7044 22 16 1097 1737 1985 2118 1742 1622 1849 1633 1784 1956 1738 1789 1876 1749 1793 1767 1746 1730 1735 1789 1726 1817 1829 1831 1873 1979 ]
G [ 1808 1845 1761 1929 1845 1968 1962 1929 1908 1708 1724 1910 1922 1873 1859 2072 1833 1817 75 5 2188 0 5944 6983 1620 1260 1417 1502 2018 1962 1783 1851 2049 1813 1934 2005 1936 1885 2116 1962 1958 1925 1941 1936 1945 1853 1853 1873 1926 1806 ]
T [ 1626 1725 1732 1660 1587 1654 1603 1664 1676 1805 1743 1673 1841 1883 1764 1200 1608 1112 6316 15 2 5 623 67 2797 2120 1927 1923 1743 1768 1786 1723 1562 1672 1607 1696 1562 1757 1558 1674 1679 1681 1631 1678 1618 1642 1735 1630 1600 1613 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.00 0.01 -0.01 0.07 0.06 -0.02 -0.02 -0.05 0.01 0.01 0.01 0.00 ]
C [ 0.01 -0.01 0.01 0.01 -0.01 -0.04 -0.04 0.09 -0.02 -0.03 -0.00 0.00 0.01 0.01 ]
G [ 0.00 0.01 0.00 0.00 -0.02 -0.04 0.03 -0.04 0.06 0.06 -0.00 -0.01 -0.01 0.00 ]
T [ 0.00 -0.00 0.01 -0.00 0.05 -0.01 -0.05 -0.03 -0.02 -0.00 0.02 0.01 0.01 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3895

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3055

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2974

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 939

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 430

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 373

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 221

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 135

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 23

CWM

PFM

     

HCWM