Detailed information of deep learning profile BP001324.1

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This page shows detailed deep learning-derived predictions and motifs for OVOL1 in MCF-7 using a single trained BPNet model.

Model details

Name: OVOL1
Model ID: BP001324.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1544.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O14753  
Source: ENCSR829WBA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 -0.00 -0.00 0.05 -0.00 0.00 -0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 0.06 0.06 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 -0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.09 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 ]
T [ -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.05 0.07 -0.00 0.00 0.00 0.01 0.00 ]

Frequency matrix

       
A [ 1613 1600 1630 1735 1642 1618 1678 1631 1681 1679 1674 1558 1757 1562 1696 1607 1672 1562 1723 1786 1768 1743 1923 1927 2120 2797 67 623 5 2 15 6316 1112 1608 1200 1764 1883 1841 1673 1743 1805 1676 1664 1603 1654 1587 1660 1732 1725 1626 ]
C [ 1806 1926 1873 1853 1853 1945 1936 1941 1925 1958 1962 2116 1885 1936 2005 1934 1813 2049 1851 1783 1962 2018 1502 1417 1260 1620 6983 5944 0 2188 5 75 1817 1833 2072 1859 1873 1922 1910 1724 1708 1908 1929 1962 1968 1845 1929 1761 1845 1808 ]
G [ 1979 1873 1831 1829 1817 1726 1789 1735 1730 1746 1767 1793 1749 1876 1789 1738 1956 1784 1633 1849 1622 1742 2118 1985 1737 1097 16 22 7044 9 1 286 1859 1602 955 1756 1663 1755 1799 1927 1851 1837 1816 1820 1755 1870 1810 1773 1817 1976 ]
T [ 1668 1667 1732 1649 1754 1777 1663 1759 1730 1683 1663 1599 1675 1692 1576 1787 1625 1671 1859 1648 1714 1563 1523 1737 1949 1552 0 477 17 4867 7045 389 2278 2023 2839 1687 1647 1548 1684 1672 1702 1645 1657 1681 1689 1764 1667 1800 1679 1656 ]

Hypothetical CWM

   
A [ 0.01 0.01 0.01 0.02 -0.00 -0.02 -0.03 -0.05 -0.01 0.05 -0.00 0.01 -0.00 0.00 ]
C [ 0.00 -0.01 -0.01 -0.00 0.06 0.06 -0.04 0.03 -0.04 -0.02 0.00 0.00 0.01 0.00 ]
G [ 0.01 0.01 0.00 -0.00 -0.03 -0.02 0.09 -0.04 -0.04 -0.01 0.01 0.01 -0.01 0.01 ]
T [ 0.00 0.01 0.01 0.01 -0.05 -0.02 -0.02 0.06 0.07 -0.01 0.01 0.00 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3895

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3055

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2974

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 939

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 430

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 373

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 221

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 135

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 23

CWM

PFM

     

HCWM