Detailed information of deep learning profile BP001308.1

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This page shows detailed deep learning-derived predictions and motifs for BATF in GM12878 using a single trained BPNet model.

Model details

Name: BATF
Model ID: BP001308.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: B-ATF-related factors
JASPAR ID: MA0462.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR000BGT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.07 -0.00 -0.00 0.00 0.11 0.00 0.02 0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.07 0.00 -0.00 -0.00 0.00 0.03 -0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.00 0.04 -0.00 0.02 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.01 0.01 -0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.04 0.00 -0.00 -0.00 0.08 -0.00 -0.00 0.03 0.01 0.01 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 -0.00 ]

Frequency matrix

       
A [ 5820 5567 5674 5646 5858 5709 5669 5544 5621 5736 5417 5701 5948 5952 5956 5242 4771 6313 2574 1080 18338 614 301 2569 19774 3736 9537 5382 2732 7169 6669 5595 12175 5336 4637 5478 5391 5625 6177 5665 5486 5428 5335 5691 5854 5595 5460 5596 5705 5632 ]
C [ 4139 4347 4412 4416 4402 4305 4126 4125 4252 3978 4433 4331 4564 4633 4525 4000 2879 6124 1896 2717 231 8193 172 16599 4 924 2545 3737 10531 2561 2385 2579 4199 6258 4390 4234 4717 4605 3826 3943 4185 3948 4193 4400 4407 4483 4596 4465 4243 4377 ]
G [ 4389 4345 4305 4280 4185 4288 4424 4702 4447 4430 4714 4608 4317 4295 4158 4311 7028 4122 849 11692 385 9206 103 518 16 2188 627 1789 2364 4527 6919 6851 1331 4456 2248 4289 4352 4469 4342 4677 4159 4334 4425 4226 4054 4104 4051 4270 4272 4283 ]
T [ 5453 5542 5410 5459 5356 5499 5582 5430 5481 5657 5237 5161 4972 4921 5162 6248 5123 3242 14482 4312 847 1788 19225 115 7 12953 7092 8893 4174 5544 3828 4776 2096 3751 8526 5800 5341 5102 5456 5516 5971 6091 5848 5484 5486 5619 5694 5470 5581 5509 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.02 -0.02 -0.03 0.07 -0.03 -0.02 0.03 0.11 0.01 0.04 0.01 -0.01 0.01 0.01 0.01 0.04 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 0.02 0.01 -0.00 -0.02 0.05 -0.02 0.08 -0.07 -0.03 0.01 0.02 0.05 0.00 0.01 -0.01 0.02 0.03 0.02 0.01 0.01 ]
G [ 0.02 0.01 0.03 0.01 -0.03 0.06 -0.02 0.06 -0.02 -0.01 0.00 0.00 -0.03 -0.00 0.00 0.04 0.03 0.04 -0.02 0.02 -0.00 0.01 0.01 ]
T [ -0.01 0.00 0.00 -0.01 0.05 0.02 -0.02 -0.01 0.08 -0.04 -0.07 0.04 0.02 0.02 0.01 -0.00 -0.01 0.01 -0.02 -0.01 0.02 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5960

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3010

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2253

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1979

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1820

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1001

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 21

CWM

PFM

     

HCWM