Detailed information of deep learning profile BP001308.1

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This page shows detailed deep learning-derived predictions and motifs for BATF in GM12878 using a single trained BPNet model.

Model details

Name: BATF
Model ID: BP001308.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: B-ATF-related factors
JASPAR ID: MA0462.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR000BGT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.01 0.01 0.03 -0.00 -0.00 0.08 -0.00 -0.00 0.00 0.04 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 -0.00 0.01 0.01 0.01 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.02 -0.00 0.04 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 -0.00 0.03 0.00 -0.00 -0.00 0.00 0.07 0.00 0.02 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 0.00 0.02 0.00 0.11 0.00 -0.00 -0.00 0.07 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 5509 5581 5470 5694 5619 5486 5484 5848 6091 5971 5516 5456 5102 5341 5800 8526 3751 2096 4776 3828 5544 4174 8893 7092 12953 7 115 19225 1788 847 4312 14482 3242 5123 6248 5162 4921 4972 5161 5237 5657 5481 5430 5582 5499 5356 5459 5410 5542 5453 ]
C [ 4283 4272 4270 4051 4104 4054 4226 4425 4334 4159 4677 4342 4469 4352 4289 2248 4456 1331 6851 6919 4527 2364 1789 627 2188 16 518 103 9206 385 11692 849 4122 7028 4311 4158 4295 4317 4608 4714 4430 4447 4702 4424 4288 4185 4280 4305 4345 4389 ]
G [ 4377 4243 4465 4596 4483 4407 4400 4193 3948 4185 3943 3826 4605 4717 4234 4390 6258 4199 2579 2385 2561 10531 3737 2545 924 4 16599 172 8193 231 2717 1896 6124 2879 4000 4525 4633 4564 4331 4433 3978 4252 4125 4126 4305 4402 4416 4412 4347 4139 ]
T [ 5632 5705 5596 5460 5595 5854 5691 5335 5428 5486 5665 6177 5625 5391 5478 4637 5336 12175 5595 6669 7169 2732 5382 9537 3736 19774 2569 301 614 18338 1080 2574 6313 4771 5242 5956 5952 5948 5701 5417 5736 5621 5544 5669 5709 5858 5646 5674 5567 5820 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.02 -0.01 -0.02 0.01 -0.01 -0.00 0.01 0.02 0.02 0.04 -0.07 -0.04 0.08 -0.01 -0.02 0.02 0.05 -0.01 0.00 0.00 -0.01 ]
C [ 0.01 0.01 -0.00 0.02 -0.02 0.04 0.03 0.04 0.00 -0.00 -0.03 0.00 0.00 -0.01 -0.02 0.06 -0.02 0.06 -0.03 0.01 0.03 0.01 0.02 ]
G [ 0.01 0.01 0.02 0.03 0.02 -0.01 0.01 0.00 0.05 0.02 0.01 -0.03 -0.07 0.08 -0.02 0.05 -0.02 -0.00 0.01 0.02 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.00 0.04 0.01 0.01 0.01 -0.01 0.01 0.04 0.01 0.11 0.03 -0.02 -0.03 0.07 -0.03 -0.02 0.02 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5960

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3010

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2253

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1979

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1820

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1001

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 21

CWM

PFM

     

HCWM