Detailed information of deep learning profile BP001301.1

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This page shows detailed deep learning-derived predictions and motifs for ONECUT2 in HepG2 using a single trained BPNet model.

Model details

Name: ONECUT2
Model ID: BP001301.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: HD-CUT
JASPAR ID: MA0756.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O95948  
Source: ENCSR661PKJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 0.00 0.09 0.00 -0.00 0.00 0.11 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.13 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 ]
T [ -0.00 0.00 0.00 0.01 0.00 0.10 0.03 0.00 0.00 0.07 0.02 0.00 0.00 0.01 0.00 ]

Frequency matrix

       
A [ 1277 1346 1354 1371 1387 1263 1225 1336 1344 1318 1335 1261 1335 1336 1546 1298 1115 640 4919 21 42 0 5018 89 44 855 966 825 962 1109 1286 1087 1153 1313 1317 1287 1343 1295 1292 1259 1395 1387 1293 1270 1341 1238 1288 1243 1271 1219 ]
C [ 1156 1142 1151 1122 1082 1201 1230 1164 1156 1107 1224 1183 1078 1083 1127 938 1004 1086 4 3 1376 0 3 286 1916 955 1089 1148 1177 1118 1154 1304 1235 1107 1122 1086 1111 1091 1164 1134 1140 1198 1130 1160 1227 1198 1157 1135 1103 1223 ]
G [ 1215 1073 1071 1181 1137 1093 1055 1121 1032 1102 1020 1037 1169 1259 1071 1078 1133 410 31 0 18 5023 7 15 61 728 1070 907 1103 1084 1144 1067 1105 1112 1019 1144 1143 1126 1087 1057 1095 1112 1143 1161 1080 1185 1142 1155 1210 1142 ]
T [ 1385 1472 1457 1359 1427 1476 1523 1412 1501 1506 1454 1552 1451 1355 1289 1719 1781 2897 79 5009 3597 10 5 4643 3012 2495 1908 2153 1791 1722 1449 1575 1540 1501 1575 1516 1436 1521 1490 1583 1403 1336 1467 1442 1385 1412 1446 1500 1449 1449 ]

Hypothetical CWM

   
A [ 0.01 0.01 -0.00 -0.00 0.09 -0.02 -0.05 0.00 0.11 -0.02 -0.03 0.01 0.01 -0.00 -0.01 ]
C [ 0.01 0.01 0.02 0.00 -0.07 -0.04 0.10 -0.06 -0.06 0.02 0.06 -0.00 0.01 0.02 0.02 ]
G [ 0.01 0.01 0.01 0.01 -0.00 -0.06 -0.05 0.13 -0.03 -0.06 -0.03 0.03 0.01 0.01 0.01 ]
T [ -0.00 0.01 0.01 0.02 -0.02 0.10 0.04 -0.04 -0.02 0.08 0.04 0.00 0.01 0.02 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 923

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 709

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 660

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 531

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 266

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 253

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 199

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 67

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 21

CWM

PFM

     

HCWM