Detailed information of deep learning profile BP001296.1

  1. Home
  2. Deep Learning Profile > BP001296.1
This page shows detailed deep learning-derived predictions and motifs for ZNF133 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF133
Model ID: BP001296.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0314.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P52736  
Source: ENCSR283MWQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.01 -0.00 -0.00 -0.00 0.09 -0.00 0.11 0.11 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.01 -0.00 0.02 0.02 ]
G [ 0.00 0.00 -0.00 -0.00 0.09 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.12 0.07 -0.00 0.02 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 0.01 -0.00 0.08 -0.00 0.04 -0.00 -0.00 0.03 0.04 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 734 678 590 678 708 656 754 658 647 665 710 684 831 663 833 952 768 692 808 1008 464 126 109 2115 159 2181 2173 31 123 4 98 662 269 357 351 557 513 589 537 711 649 585 597 670 684 798 723 575 577 556 ]
C [ 404 346 381 337 413 453 346 412 377 427 424 475 405 542 448 328 410 581 381 248 181 15 72 5 243 0 3 56 162 1 73 720 371 1134 1269 655 494 400 452 476 370 492 464 456 476 369 393 553 550 452 ]
G [ 466 498 490 459 461 504 480 489 482 599 547 466 430 398 403 477 411 433 448 589 564 2006 68 60 235 2 8 922 51 2176 1884 117 961 289 105 264 417 485 509 463 538 468 473 497 472 469 538 492 477 479 ]
T [ 584 666 727 714 606 575 608 629 682 497 507 563 522 585 504 431 599 482 551 343 979 41 1939 8 1551 5 4 1179 1852 7 133 689 587 408 463 712 764 714 690 538 631 643 654 565 556 552 534 568 584 701 ]

Hypothetical CWM

   
A [ -0.00 0.02 0.02 0.01 0.02 0.02 0.03 -0.01 0.02 -0.01 0.10 -0.01 0.11 0.11 -0.05 -0.00 -0.03 -0.01 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.03 0.00 0.01 0.04 0.02 0.02 0.01 0.05 -0.01 -0.01 -0.02 0.04 -0.05 -0.01 -0.00 0.04 -0.01 0.01 0.05 0.00 0.04 0.05 0.03 0.02 ]
G [ 0.01 0.01 0.02 0.01 0.02 0.02 0.02 0.01 0.10 -0.01 0.01 -0.00 -0.01 -0.02 0.05 -0.03 0.12 0.08 -0.02 0.06 0.00 -0.00 0.01 0.01 ]
T [ 0.01 0.00 -0.00 0.00 0.01 0.01 0.00 0.03 -0.02 0.09 -0.04 0.06 -0.02 -0.03 0.06 0.05 -0.01 -0.01 0.02 0.01 0.00 0.01 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1390

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1371

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1019

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 612

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 194

CWM

PFM

     

HCWM