Detailed information of deep learning profile BP001296.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF133 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF133
Model ID: BP001296.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0314.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P52736  
Source: ENCSR283MWQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.04 0.03 -0.00 -0.00 0.04 -0.00 0.08 -0.00 0.01 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.02 -0.00 0.07 0.12 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.09 -0.00 -0.00 0.00 0.00 ]
G [ 0.02 0.02 -0.00 0.01 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.11 0.11 -0.00 0.09 -0.00 -0.00 -0.00 0.01 0.00 0.00 ]

Frequency matrix

       
A [ 701 584 568 534 552 556 565 654 643 631 538 690 714 764 712 463 408 587 689 133 7 1852 1179 4 5 1551 8 1939 41 979 343 551 482 599 431 504 585 522 563 507 497 682 629 608 575 606 714 727 666 584 ]
C [ 479 477 492 538 469 472 497 473 468 538 463 509 485 417 264 105 289 961 117 1884 2176 51 922 8 2 235 60 68 2006 564 589 448 433 411 477 403 398 430 466 547 599 482 489 480 504 461 459 490 498 466 ]
G [ 452 550 553 393 369 476 456 464 492 370 476 452 400 494 655 1269 1134 371 720 73 1 162 56 3 0 243 5 72 15 181 248 381 581 410 328 448 542 405 475 424 427 377 412 346 453 413 337 381 346 404 ]
T [ 556 577 575 723 798 684 670 597 585 649 711 537 589 513 557 351 357 269 662 98 4 123 31 2173 2181 159 2115 109 126 464 1008 808 692 768 952 833 663 831 684 710 665 647 658 754 656 708 678 590 678 734 ]

Hypothetical CWM

   
A [ 0.01 0.00 0.01 0.00 0.01 0.02 -0.01 -0.01 0.05 0.06 -0.03 -0.02 0.06 -0.04 0.09 -0.02 0.03 0.00 0.01 0.01 0.00 -0.00 0.00 0.01 ]
C [ 0.01 0.01 -0.00 0.00 0.06 -0.02 0.08 0.12 -0.03 0.05 -0.02 -0.01 -0.00 0.01 -0.01 0.10 0.01 0.02 0.02 0.02 0.01 0.02 0.01 0.01 ]
G [ 0.02 0.03 0.05 0.04 0.00 0.05 0.01 -0.01 0.04 -0.00 -0.01 -0.05 0.04 -0.02 -0.01 -0.01 0.05 0.01 0.02 0.02 0.04 0.01 0.00 0.03 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.01 -0.03 -0.00 -0.05 0.11 0.11 -0.01 0.10 -0.01 0.02 -0.01 0.03 0.02 0.02 0.01 0.02 0.02 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1390

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1371

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1019

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 612

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 194

CWM

PFM

     

HCWM