Detailed information of deep learning profile BP001295.1

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This page shows detailed deep learning-derived predictions and motifs for CREB3L1 in K562 using a single trained BPNet model.

Model details

Name: CREB3L1
Model ID: BP001295.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0839.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96BA8  
Source: ENCSR109YGM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.03 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.00 0.04 0.00 0.00 0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 ]
G [ 0.01 0.00 -0.00 0.00 0.00 -0.00 0.05 -0.00 0.02 0.02 -0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.03 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 672 692 599 633 614 600 639 674 651 667 656 650 588 636 638 752 643 540 509 566 653 416 2769 3 7 9 29 61 376 1130 623 569 649 710 650 695 662 686 649 622 632 660 635 702 667 648 646 632 652 669 ]
C [ 997 957 1034 1028 1039 1017 998 962 1063 1033 1076 1116 1057 1049 1067 883 1093 962 535 1088 1517 1371 54 3380 2 32 51 13 2831 755 849 1079 1019 874 1094 948 925 991 987 1062 1065 1000 1033 977 980 984 1034 1073 1018 982 ]
G [ 1061 1101 1108 1038 1053 1123 1126 1096 1078 1012 1010 1016 1087 1059 1022 1176 1133 889 1813 1146 421 1088 447 6 3397 2 3283 2988 75 846 1391 1057 1099 1174 1110 1090 1283 1115 1128 1092 1077 1118 1111 1081 1083 1098 1048 1048 1113 1065 ]
T [ 676 656 665 707 700 666 643 674 614 694 664 624 674 662 679 595 537 1015 549 606 815 531 136 17 0 3363 43 344 124 675 543 701 639 648 552 673 536 614 642 630 632 628 627 646 676 676 678 653 623 690 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.03 -0.02 -0.00 -0.01 -0.01 -0.00 -0.00 0.01 0.00 0.00 0.00 ]
C [ 0.00 0.01 0.00 0.00 0.01 0.01 -0.02 0.04 -0.02 0.01 0.00 -0.02 0.02 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 0.01 0.01 -0.02 0.05 -0.03 0.02 0.02 -0.01 0.01 0.00 0.01 0.00 ]
T [ 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 -0.02 0.03 -0.01 0.01 -0.00 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1508

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 868

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 742

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 378

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 179

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 30

CWM

PFM

     

HCWM