Detailed information of deep learning profile BP001295.1

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This page shows detailed deep learning-derived predictions and motifs for CREB3L1 in K562 using a single trained BPNet model.

Model details

Name: CREB3L1
Model ID: BP001295.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0839.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96BA8  
Source: ENCSR109YGM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.03 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.00 0.02 0.02 -0.00 0.05 -0.00 0.00 0.00 -0.00 0.00 0.01 ]
G [ 0.00 0.00 0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 0.04 -0.00 0.00 0.01 0.00 0.00 ]
T [ 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 690 623 653 678 676 676 646 627 628 632 630 642 614 536 673 552 648 639 701 543 675 124 344 43 3363 0 17 136 531 815 606 549 1015 537 595 679 662 674 624 664 694 614 674 643 666 700 707 665 656 676 ]
C [ 1065 1113 1048 1048 1098 1083 1081 1111 1118 1077 1092 1128 1115 1283 1090 1110 1174 1099 1057 1391 846 75 2988 3283 2 3397 6 447 1088 421 1146 1813 889 1133 1176 1022 1059 1087 1016 1010 1012 1078 1096 1126 1123 1053 1038 1108 1101 1061 ]
G [ 982 1018 1073 1034 984 980 977 1033 1000 1065 1062 987 991 925 948 1094 874 1019 1079 849 755 2831 13 51 32 2 3380 54 1371 1517 1088 535 962 1093 883 1067 1049 1057 1116 1076 1033 1063 962 998 1017 1039 1028 1034 957 997 ]
T [ 669 652 632 646 648 667 702 635 660 632 622 649 686 662 695 650 710 649 569 623 1130 376 61 29 9 7 3 2769 416 653 566 509 540 643 752 638 636 588 650 656 667 651 674 639 600 614 633 599 692 672 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 -0.00 0.01 -0.01 0.03 -0.02 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.01 0.00 0.01 -0.01 0.02 0.02 -0.03 0.05 -0.02 0.01 0.01 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.02 -0.02 0.00 0.01 -0.02 0.04 -0.02 0.01 0.01 0.00 0.00 0.01 0.00 ]
T [ 0.00 0.00 0.00 0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.02 0.03 -0.00 0.00 -0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1508

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 868

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 742

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 378

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 179

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 30

CWM

PFM

     

HCWM