Detailed information of deep learning profile BP001284.1

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This page shows detailed deep learning-derived predictions and motifs for MTF1 in HepG2 using a single trained BPNet model.

Model details

Name: MTF1
Model ID: BP001284.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0863.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14872  
Source: ENCSR194NVP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.02 0.00 0.00 -0.00 0.00 -0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 0.00 -0.00 0.01 0.00 0.01 -0.00 -0.00 0.02 -0.00 0.02 -0.00 0.02 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 0.01 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 49 59 49 57 54 59 71 62 57 60 63 83 74 80 56 80 28 26 37 12 15 5 17 1 3 4 7 230 101 147 50 42 38 49 55 75 44 56 43 54 64 74 46 57 86 58 40 51 40 70 ]
C [ 55 54 54 62 56 60 64 69 56 57 52 47 50 46 51 45 14 26 14 176 179 0 8 4 20 1 220 0 40 27 42 55 89 54 76 60 55 43 66 84 57 40 50 47 51 41 70 53 93 70 ]
G [ 62 75 72 55 80 67 50 66 72 85 74 49 54 57 78 58 167 135 171 14 14 223 43 226 1 229 5 1 81 18 121 87 56 74 67 52 81 97 69 59 52 79 71 90 58 81 80 80 60 60 ]
T [ 68 46 59 60 44 48 49 37 49 32 45 55 56 51 49 51 25 47 12 32 26 6 166 3 210 0 2 3 12 42 21 50 51 57 36 47 54 38 56 37 61 41 67 40 39 54 44 50 41 34 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 0.01 0.01 0.01 0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 0.00 0.00 0.01 -0.00 0.01 -0.00 0.02 0.02 -0.01 0.00 -0.01 0.01 -0.01 0.02 -0.01 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.01 -0.01 -0.00 0.02 -0.00 0.02 -0.01 0.02 -0.01 -0.00 -0.00 -0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.01 -0.01 0.01 -0.01 0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1360

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 306

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 245

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 156

CWM

PFM

     

HCWM