Detailed information of deep learning profile BP001283.1

This page shows detailed deep learning-derived predictions and motifs for KLF9 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: KLF9
Model ID: BP001283.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA1107.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13886  
Source: ENCSR938ETG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.02 -0.00 0.01 0.01 0.01 0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 272 272 259 256 278 263 274 256 293 271 281 280 264 247 219 199 258 320 322 205 157 91 796 2 230 2 11 39 390 52 209 198 192 202 170 208 235 243 292 254 254 263 273 254 262 251 271 265 297 251 ]
C [ 518 513 491 528 513 515 553 530 521 556 517 526 521 534 632 601 590 571 221 94 1176 1368 633 1501 6 1478 1477 1416 951 1204 470 548 619 604 505 507 573 581 521 494 532 563 490 542 541 532 525 559 514 516 ]
G [ 458 464 502 449 458 455 458 441 420 401 427 456 450 492 366 469 459 393 758 1142 108 27 91 5 1279 16 32 23 50 69 197 394 519 382 607 541 447 434 449 504 473 416 449 437 454 486 462 433 449 471 ]
T [ 280 279 276 295 279 295 243 301 294 300 303 266 293 255 311 259 221 244 227 87 87 42 8 20 13 32 8 50 137 203 652 388 198 340 246 272 273 270 266 276 269 286 316 295 271 259 270 271 268 290 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.01 0.01 -0.00 0.02 -0.01 0.01 0.01 0.01 0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.00 -0.00 0.00 -0.01 0.02 -0.01 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 682

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 601

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 270

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 254

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 251

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 226

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 223

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 208

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 192

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 179

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 135

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 121

1 profiles found for the same TF (KLF9) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001282.1 KLF9 ENCSR125ZYC MCF-7 Homo sapiens MA1107.3
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