Detailed information of deep learning profile BP001283.1

This page shows detailed deep learning-derived predictions and motifs for KLF9 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: KLF9
Model ID: BP001283.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA1107.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13886  
Source: ENCSR938ETG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.00 0.01 0.01 0.01 -0.00 0.02 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 290 268 271 270 259 271 295 316 286 269 276 266 270 273 272 246 340 198 388 652 203 137 50 8 32 13 20 8 42 87 87 227 244 221 259 311 255 293 266 303 300 294 301 243 295 279 295 276 279 280 ]
C [ 471 449 433 462 486 454 437 449 416 473 504 449 434 447 541 607 382 519 394 197 69 50 23 32 16 1279 5 91 27 108 1142 758 393 459 469 366 492 450 456 427 401 420 441 458 455 458 449 502 464 458 ]
G [ 516 514 559 525 532 541 542 490 563 532 494 521 581 573 507 505 604 619 548 470 1204 951 1416 1477 1478 6 1501 633 1368 1176 94 221 571 590 601 632 534 521 526 517 556 521 530 553 515 513 528 491 513 518 ]
T [ 251 297 265 271 251 262 254 273 263 254 254 292 243 235 208 170 202 192 198 209 52 390 39 11 2 230 2 796 91 157 205 322 320 258 199 219 247 264 280 281 271 293 256 274 263 278 256 259 272 272 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.01 0.02 -0.01 0.00 -0.00 -0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.00 0.01 0.01 0.01 -0.01 0.02 -0.00 0.01 0.01 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.01 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 682

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 601

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 270

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 254

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 251

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 226

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 223

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 208

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 192

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 179

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 135

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 121

1 profiles found for the same TF (KLF9) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001282.1 KLF9 ENCSR125ZYC MCF-7 Homo sapiens MA1107.3
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