Detailed information of deep learning profile BP001277.1

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This page shows detailed deep learning-derived predictions and motifs for HLF in HepG2 using a single trained BPNet model.

Model details

Name: HLF
Model ID: BP001277.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0043.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16534  
Source: ENCSR528PSI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.04 -0.00 0.05 -0.00 0.10 0.12 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.07 -0.00 0.01 0.00 -0.00 0.02 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.02 -0.00 0.00 0.03 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.11 0.12 -0.00 0.01 -0.00 0.08 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 7583 6987 7373 7009 7476 8051 7597 7114 7128 7052 7154 7127 7675 7749 7016 5644 9420 41 3 12839 223 22373 310 22060 24826 901 8211 7232 6330 7585 6952 6976 7465 7631 7463 7084 6570 7174 7332 7065 7239 7420 7504 7457 7719 6859 7794 7575 7554 7367 ]
C [ 5056 5306 4990 5011 5419 4954 4964 5076 4621 4904 4908 5415 4666 5061 5247 3454 3962 105 18 119 19827 620 4323 2759 9 11177 6566 5272 6232 5125 5466 5133 5473 5462 4898 4961 5574 5803 5448 5182 4907 4943 5199 4820 5162 6183 5278 5129 5090 4924 ]
G [ 5319 5032 5219 6133 5076 4787 5425 5222 5561 5694 6259 5205 5896 5867 5020 7100 10597 9 150 11636 208 1580 270 75 59 4074 3610 5701 4603 5220 4909 5339 5181 4834 5178 5788 4663 4937 4902 5360 5333 5281 4760 5154 5175 4857 4809 5434 5127 5243 ]
T [ 6952 7585 7328 6757 6939 7118 6924 7498 7600 7260 6589 7163 6673 6233 7627 8712 931 24755 24739 316 4652 337 20007 16 16 8758 6523 6705 7745 6980 7583 7462 6791 6983 7371 7077 8103 6996 7228 7303 7431 7266 7447 7479 6854 7011 7029 6772 7139 7376 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.03 -0.05 -0.10 0.08 -0.03 0.06 -0.03 0.11 0.12 -0.04 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.02 0.01 0.01 -0.02 -0.04 -0.05 0.09 -0.02 0.05 0.03 -0.05 0.05 0.03 0.01 0.01 0.01 ]
G [ 0.01 0.02 0.01 0.02 0.05 -0.05 0.02 0.06 -0.03 0.09 -0.04 -0.04 -0.02 0.01 0.01 0.02 0.01 0.01 ]
T [ -0.00 -0.00 0.01 0.01 -0.04 0.11 0.12 -0.03 0.06 -0.04 0.09 -0.09 -0.06 0.03 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 976

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 762

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 698

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 324

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 288

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 222

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 181

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 125

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 107

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 99

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 54

CWM

PFM

     

HCWM