Detailed information of deep learning profile BP001274.1

This page shows detailed deep learning-derived predictions and motifs for SCRT2 in HEK293 using a single trained BPNet model.

Model details

Name: SCRT2
Model ID: BP001274.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0744.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NQ03  
Source: ENCSR338DGO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.00 0.05 0.09 -0.00 0.08 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 0.00 0.09 -0.00 -0.00 0.14 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.08 -0.00 0.02 0.01 -0.00 -0.00 ]
T [ -0.00 -0.00 0.00 0.01 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.07 0.00 -0.00 0.00 0.00 ]

Frequency matrix

A [ 6618 6776 7667 6377 6787 7791 7610 7904 8431 7766 6053 7392 6698 7038 6534 6135 9514 10231 2516 647 18427 22500 1 22756 4598 681 485 3359 4283 4998 5673 6165 7211 6115 7686 6388 6743 7763 6175 5962 5646 6371 6594 7311 6458 7239 7751 7702 6612 7151 ]
C [ 4954 6134 4907 4599 5088 4877 5240 4779 4347 4824 5345 4760 5718 6071 5009 5229 4149 2173 2648 20608 2421 7 23214 57 186 326 1159 2050 5178 5491 4838 4173 5359 4834 4224 5025 4735 4616 5022 4974 5435 5061 4681 5051 4561 4868 4612 4907 4695 5322 ]
G [ 5051 4793 4970 4802 4626 4699 4880 5224 4732 5165 5925 4424 5547 5013 6094 6804 5875 4028 10282 328 707 440 2 16 18048 21325 471 13562 8139 5205 4974 7722 4896 6406 6007 6599 6315 4972 4777 6388 5185 5901 6194 5406 6587 5522 4814 4819 4943 4732 ]
T [ 6596 5516 5675 7441 6718 5852 5489 5312 5709 5464 5896 6643 5256 5097 5582 5051 3681 6787 7773 1636 1664 272 2 390 387 887 21104 4248 5619 7525 7734 5159 5753 5864 5302 5207 5426 5868 7245 5895 6953 5886 5750 5451 5613 5590 6042 5791 6969 6014 ]

Hypothetical CWM

A [ 0.01 0.00 0.02 0.02 -0.02 -0.03 0.06 0.09 -0.03 0.08 0.03 -0.01 -0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.01 -0.00 0.09 -0.01 -0.07 0.14 -0.01 -0.02 -0.03 0.01 -0.00 0.00 0.01 0.01 ]
G [ 0.01 0.02 0.02 -0.00 0.05 -0.02 0.01 -0.01 -0.03 -0.05 0.07 0.09 -0.03 0.04 0.03 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.01 0.02 0.02 -0.01 -0.00 -0.02 0.00 -0.03 0.00 0.08 0.01 0.00 0.01 0.01 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1053

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 659

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 461

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 418

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 146

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 86

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 70

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 25