Detailed information of deep learning profile BP001274.1

This page shows detailed deep learning-derived predictions and motifs for SCRT2 in HEK293 using a single trained BPNet model.

Model details

Name: SCRT2
Model ID: BP001274.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0744.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NQ03  
Source: ENCSR338DGO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 0.00 0.07 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.01 0.02 -0.00 0.08 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.14 -0.00 -0.00 0.09 0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.08 -0.00 0.09 0.05 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 6014 6969 5791 6042 5590 5613 5451 5750 5886 6953 5895 7245 5868 5426 5207 5302 5864 5753 5159 7734 7525 5619 4248 21104 887 387 390 2 272 1664 1636 7773 6787 3681 5051 5582 5097 5256 6643 5896 5464 5709 5312 5489 5852 6718 7441 5675 5516 6596 ]
C [ 4732 4943 4819 4814 5522 6587 5406 6194 5901 5185 6388 4777 4972 6315 6599 6007 6406 4896 7722 4974 5205 8139 13562 471 21325 18048 16 2 440 707 328 10282 4028 5875 6804 6094 5013 5547 4424 5925 5165 4732 5224 4880 4699 4626 4802 4970 4793 5051 ]
G [ 5322 4695 4907 4612 4868 4561 5051 4681 5061 5435 4974 5022 4616 4735 5025 4224 4834 5359 4173 4838 5491 5178 2050 1159 326 186 57 23214 7 2421 20608 2648 2173 4149 5229 5009 6071 5718 4760 5345 4824 4347 4779 5240 4877 5088 4599 4907 6134 4954 ]
T [ 7151 6612 7702 7751 7239 6458 7311 6594 6371 5646 5962 6175 7763 6743 6388 7686 6115 7211 6165 5673 4998 4283 3359 485 681 4598 22756 1 22500 18427 647 2516 10231 9514 6135 6534 7038 6698 7392 6053 7766 8431 7904 7610 7791 6787 6377 7667 6776 6618 ]

Hypothetical CWM

A [ 0.01 0.01 0.00 0.01 0.08 0.00 -0.03 0.00 -0.02 -0.00 -0.01 0.02 0.02 0.01 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.03 0.04 -0.03 0.09 0.07 -0.05 -0.03 -0.01 0.01 -0.02 0.05 -0.00 0.02 0.02 0.01 ]
G [ 0.01 0.01 0.00 -0.00 0.01 -0.03 -0.02 -0.01 0.14 -0.07 -0.01 0.09 -0.00 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.03 -0.01 0.03 0.08 -0.03 0.09 0.06 -0.03 -0.02 0.02 0.02 0.00 0.01 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1053

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 659

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 461

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 418

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 146

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 86

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 70

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 25