Detailed information of deep learning profile BP001268.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPD in HepG2 using a single trained BPNet model.

Model details

Name: CEBPD
Model ID: BP001268.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0836.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49716  
Source: ENCSR520MCD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.08 0.09 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.05 0.00 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.01 0.00 0.01 0.01 -0.00 0.02 0.02 -0.00 0.08 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.08 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3804 4452 3744 3756 3621 5311 3639 3912 3614 3809 3753 3647 5227 3982 3756 4096 3683 4871 6169 24 53 5309 2260 132 2564 15479 15613 524 4635 3987 2821 4008 3596 3317 3660 3531 5498 3527 3649 3531 3529 5432 4933 3547 3652 3652 3740 3878 4706 3967 ]
C [ 4271 3391 4764 4775 5022 3143 3300 3227 5074 3465 3248 3306 3463 3533 3293 2744 4786 1939 2248 49 19 133 3798 49 11048 151 6 4359 6063 3637 4929 3445 3309 5314 3380 5080 3231 4764 3332 3401 5024 3341 3308 4833 4900 3389 4531 3936 3222 4681 ]
G [ 3184 4029 3415 3276 3346 3479 5066 4950 3273 3121 4866 5039 3542 4814 3543 5897 3968 4765 6753 17 6796 7002 1903 15359 5 3 4 2139 2235 3280 3016 4202 5259 3477 3308 3289 3277 3479 3257 5036 3213 3267 3783 3462 3341 3305 3283 3919 4147 3452 ]
T [ 4379 3766 3715 3831 3649 3705 3633 3549 3677 5243 3771 3646 3406 3309 5046 2901 3201 4063 468 15548 8770 3194 7677 98 2021 5 15 8616 2705 4734 4872 3983 3474 3530 5290 3738 3632 3868 5400 3670 3872 3598 3614 3796 3745 5292 4084 3905 3563 3538 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.01 0.03 -0.06 -0.05 0.02 -0.02 -0.02 0.01 0.08 0.09 -0.05 0.01 -0.00 -0.01 -0.01 ]
C [ 0.02 0.02 0.02 0.00 0.01 -0.01 -0.06 -0.06 0.07 -0.01 0.06 0.01 -0.04 0.04 0.02 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.03 0.04 -0.03 0.04 0.03 -0.02 0.08 -0.08 -0.06 -0.03 0.00 0.01 0.02 0.02 0.01 ]
T [ -0.01 -0.01 -0.00 0.01 -0.04 0.08 0.06 0.01 0.00 -0.01 0.02 -0.06 -0.05 0.03 -0.01 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2323

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1330

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 540

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 468

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 212

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 161

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 31

CWM

PFM

     

HCWM