Detailed information of deep learning profile BP001263.1

This page shows detailed deep learning-derived predictions and motifs for ZNF394 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF394
Model ID: BP001263.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0813.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q53GI3  
Source: ENCSR125DNC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.05 -0.00 0.00 0.05 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.06 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.02 0.05 0.00 0.04 -0.00 0.00 0.03 0.00 0.00 0.01 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 -0.00 0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 1289 1400 1397 1515 1226 1260 1164 1251 2783 1073 1226 1323 1521 1540 1371 1578 420 6963 41 1705 6993 72 5 688 188 1517 1458 2956 1122 1301 2825 1170 2877 1159 1345 1435 2016 1346 1634 1285 1635 1307 1283 2672 1395 1202 2611 1352 1550 1256 ]
C [ 2678 2758 1828 1613 3001 2913 1480 2893 1330 1512 3013 2709 1398 2745 1556 237 22 36 10 1275 75 315 7102 407 733 1031 1074 1176 2480 1468 1266 3039 1256 1340 1412 2392 1370 2346 1891 2292 1546 2860 2874 1632 2730 2840 1559 2350 1547 2886 ]
G [ 1884 1689 1663 2894 1680 1714 1962 1872 1884 3549 1761 1752 1780 1949 2135 5003 6662 90 6619 417 31 6456 1 857 5484 3748 3772 2006 1715 1652 2023 1784 1736 3585 3287 1784 2643 1723 2456 1782 2810 1645 1762 1694 1700 1811 1755 1692 2839 1724 ]
T [ 1258 1262 2221 1087 1202 1222 2503 1093 1112 975 1109 1325 2410 875 2047 291 5 20 439 3712 10 266 1 5157 704 813 805 971 1792 2688 995 1116 1240 1025 1065 1498 1080 1694 1128 1750 1118 1297 1190 1111 1284 1256 1184 1715 1173 1243 ]

Hypothetical CWM

A [ 0.00 0.00 0.00 0.00 0.01 0.02 0.05 -0.01 0.01 0.05 -0.01 -0.01 -0.01 -0.01 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.01 -0.04 -0.01 -0.04 0.00 -0.00 -0.01 0.06 -0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 0.03 0.05 -0.00 0.04 -0.02 -0.02 0.03 -0.02 0.01 0.02 0.01 0.01 0.01 0.00 ]
T [ 0.00 -0.00 -0.00 0.01 -0.02 -0.03 -0.02 0.02 0.03 -0.02 0.00 -0.01 0.02 0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2888

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2426

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 20