Detailed information of deep learning profile BP001263.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF394 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF394
Model ID: BP001263.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0813.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q53GI3  
Source: ENCSR125DNC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 0.00 -0.00 0.00 0.02 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 0.03 0.00 -0.00 0.04 0.00 0.05 0.02 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.06 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.05 0.00 -0.00 0.05 0.00 0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1243 1173 1715 1184 1256 1284 1111 1190 1297 1118 1750 1128 1694 1080 1498 1065 1025 1240 1116 995 2688 1792 971 805 813 704 5157 1 266 10 3712 439 20 5 291 2047 875 2410 1325 1109 975 1112 1093 2503 1222 1202 1087 2221 1262 1258 ]
C [ 1724 2839 1692 1755 1811 1700 1694 1762 1645 2810 1782 2456 1723 2643 1784 3287 3585 1736 1784 2023 1652 1715 2006 3772 3748 5484 857 1 6456 31 417 6619 90 6662 5003 2135 1949 1780 1752 1761 3549 1884 1872 1962 1714 1680 2894 1663 1689 1884 ]
G [ 2886 1547 2350 1559 2840 2730 1632 2874 2860 1546 2292 1891 2346 1370 2392 1412 1340 1256 3039 1266 1468 2480 1176 1074 1031 733 407 7102 315 75 1275 10 36 22 237 1556 2745 1398 2709 3013 1512 1330 2893 1480 2913 3001 1613 1828 2758 2678 ]
T [ 1256 1550 1352 2611 1202 1395 2672 1283 1307 1635 1285 1634 1346 2016 1435 1345 1159 2877 1170 2825 1301 1122 2956 1458 1517 188 688 5 72 6993 1705 41 6963 420 1578 1371 1540 1521 1323 1226 1073 2783 1251 1164 1260 1226 1515 1397 1400 1289 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.01 0.02 -0.01 0.00 -0.02 0.03 0.02 -0.02 -0.03 -0.02 0.01 -0.00 -0.00 0.00 ]
C [ 0.00 0.01 0.01 0.01 0.02 0.01 -0.02 0.03 -0.02 -0.02 0.04 -0.00 0.05 0.03 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.00 0.06 -0.01 -0.00 0.00 -0.04 -0.01 -0.04 -0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 -0.01 -0.01 -0.01 -0.01 0.05 0.01 -0.01 0.05 0.02 0.01 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2888

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2426

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 20

CWM

PFM

     

HCWM