Detailed information of deep learning profile BP001262.1

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This page shows detailed deep learning-derived predictions and motifs for ZFP3 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZFP3
Model ID: BP001262.1
Cell line/tissue: SK-N-SH
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0153.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96NJ6  
Source: ENCSR581GUY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.07 -0.00 0.00 0.07 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.01 -0.00 0.01 ]
G [ 0.00 -0.00 0.00 0.02 0.03 0.03 0.00 -0.00 0.00 -0.00 0.02 0.00 0.00 0.04 0.01 -0.00 -0.00 0.02 -0.00 0.01 0.00 -0.00 0.03 0.07 -0.00 0.08 -0.00 -0.00 -0.00 0.01 -0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.01 0.01 0.02 -0.00 0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 0.00 -0.00 0.04 0.00 -0.00 -0.00 -0.00 -0.00 0.03 0.02 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1528 951 906 952 1155 1692 1267 940 1133 858 694 639 521 669 527 689 841 2010 1859 741 600 1964 901 1149 1871 1937 85 4499 529 396 4612 46 203 223 306 1179 870 788 1776 1175 1149 1080 1538 1325 1613 1252 1538 1553 1310 1287 ]
C [ 939 1106 1130 929 885 891 990 1524 700 461 398 660 1545 1241 1167 834 459 919 1144 145 593 993 668 367 884 550 659 69 196 17 13 12 1148 942 2080 599 1886 1612 739 856 939 1219 838 886 971 1088 967 895 927 934 ]
G [ 1184 1065 1090 1198 1744 1240 1563 899 1231 2730 2966 2826 688 806 845 529 2737 1100 981 3360 2766 789 512 2813 891 1938 674 39 3832 4306 55 4639 215 541 537 1908 876 959 1316 1876 1717 1168 1441 1673 1242 1380 1265 1327 1515 1539 ]
T [ 1089 1618 1614 1661 956 917 920 1377 1676 691 682 615 1986 2024 2201 2688 703 711 756 494 781 994 2659 411 1094 315 3322 133 183 21 60 43 3174 3034 1817 1054 1108 1381 909 833 935 1273 923 856 914 1020 970 965 988 980 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.01 -0.02 -0.02 0.00 -0.01 0.00 0.01 0.00 -0.00 0.00 -0.01 0.01 0.01 0.01 0.01 0.02 -0.03 0.07 -0.00 0.02 0.07 -0.03 -0.02 -0.02 -0.02 -0.00 -0.00 -0.01 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.01 -0.01 0.00 0.02 0.00 0.01 0.01 -0.01 0.01 0.03 -0.01 0.01 0.01 0.01 -0.00 0.01 0.00 0.01 -0.01 0.01 -0.06 -0.03 -0.04 0.02 0.01 0.03 -0.01 0.01 0.01 0.00 ]
G [ 0.00 -0.00 -0.00 0.01 0.02 0.03 0.03 -0.01 0.00 0.00 -0.02 0.03 0.01 0.01 0.05 0.02 -0.00 -0.01 0.03 0.00 0.03 0.00 -0.04 0.03 0.07 -0.01 0.08 -0.02 -0.00 -0.01 0.02 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.02 -0.01 -0.01 0.02 0.01 0.02 0.02 -0.01 0.01 -0.00 -0.01 0.01 0.02 0.02 -0.01 0.01 -0.01 0.05 -0.01 -0.02 -0.03 -0.02 -0.02 0.03 0.02 0.01 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3405

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1895

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 416

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 312

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 232

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 107

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 75

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 20

CWM

PFM

     

HCWM

1 profiles found for the same TF (ZFP3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001261.1 ZFP3 ENCSR134QIE HEK293 Homo sapiens UN0153.2
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