Detailed information of deep learning profile BP001260.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF610 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF610
Model ID: BP001260.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1713.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8N9Z0  
Source: ENCSR691TXI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.01 -0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 0.01 0.03 0.00 0.03 0.00 0.03 0.01 -0.00 0.00 0.00 -0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 595 495 507 580 615 522 602 544 548 538 540 640 697 566 613 615 581 685 579 479 581 926 495 786 886 503 20 2678 9 0 17 92 133 726 430 618 686 650 589 570 561 511 612 454 585 486 510 635 626 499 ]
C [ 757 798 770 815 723 841 715 791 749 700 710 743 702 791 658 634 684 655 612 847 836 449 521 410 489 123 21 9 4 2710 12 223 2209 540 629 744 633 682 841 663 670 917 690 734 845 749 749 722 662 779 ]
G [ 928 948 904 870 916 920 948 930 1048 1040 901 851 872 857 989 1020 1030 866 1069 982 833 781 767 1132 1203 1767 2645 20 2704 4 2681 1997 101 729 1289 839 940 961 805 918 1065 881 878 1082 815 911 974 881 989 981 ]
T [ 437 476 536 452 463 434 452 452 372 439 566 483 446 503 457 448 422 511 457 409 467 561 934 389 139 324 31 10 0 3 7 405 274 722 369 516 458 424 482 566 421 408 537 447 472 571 484 479 440 458 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 0.00 -0.01 0.02 -0.00 -0.02 -0.01 -0.01 -0.00 0.00 0.00 0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.00 -0.01 -0.00 -0.01 0.03 -0.01 -0.00 0.02 -0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 0.01 0.03 -0.01 0.03 -0.02 0.03 0.01 -0.01 0.00 0.00 0.00 0.00 ]
T [ 0.01 0.00 -0.00 -0.00 -0.00 -0.01 -0.02 0.00 -0.02 0.00 0.01 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1850

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 800

CWM

PFM

     

HCWM