Detailed information of deep learning profile BP001260.1

  1. Home
  2. Deep Learning Profile > BP001260.1
This page shows detailed deep learning-derived predictions and motifs for ZNF610 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF610
Model ID: BP001260.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1713.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8N9Z0  
Source: ENCSR691TXI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 0.01 0.03 0.00 0.03 0.00 0.03 0.01 0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 ]
T [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 458 440 479 484 571 472 447 537 408 421 566 482 424 458 516 369 722 274 405 7 3 0 10 31 324 139 389 934 561 467 409 457 511 422 448 457 503 446 483 566 439 372 452 452 434 463 452 536 476 437 ]
C [ 981 989 881 974 911 815 1082 878 881 1065 918 805 961 940 839 1289 729 101 1997 2681 4 2704 20 2645 1767 1203 1132 767 781 833 982 1069 866 1030 1020 989 857 872 851 901 1040 1048 930 948 920 916 870 904 948 928 ]
G [ 779 662 722 749 749 845 734 690 917 670 663 841 682 633 744 629 540 2209 223 12 2710 4 9 21 123 489 410 521 449 836 847 612 655 684 634 658 791 702 743 710 700 749 791 715 841 723 815 770 798 757 ]
T [ 499 626 635 510 486 585 454 612 511 561 570 589 650 686 618 430 726 133 92 17 0 9 2678 20 503 886 786 495 926 581 479 579 685 581 615 613 566 697 640 540 538 548 544 602 522 615 580 507 495 595 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 0.01 0.00 -0.02 0.00 -0.02 -0.01 -0.00 -0.00 -0.00 0.00 0.01 ]
C [ 0.00 0.00 0.00 0.00 -0.01 0.01 0.03 -0.02 0.03 -0.01 0.03 0.01 0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.01 0.03 -0.01 -0.00 -0.01 0.00 0.00 -0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 -0.01 -0.01 -0.02 -0.00 0.02 -0.01 0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1850

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 800

CWM

PFM

     

HCWM