Detailed information of deep learning profile BP001257.1

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This page shows detailed deep learning-derived predictions and motifs for TBX21 in GM12878 using a single trained BPNet model.

Model details

Name: TBX21
Model ID: BP001257.1
Cell line/tissue: GM12878
Class: T-Box factors
Family: TBrain-related factors
JASPAR ID: MA0690.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UL17  
Source: ENCSR739IHN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.03 0.00 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.07 0.00 0.05 0.02 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.01 0.01 0.05 -0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 ]

Frequency matrix

       
A [ 1835 2008 1976 1987 1941 1852 1932 2060 1793 1979 1810 1778 1752 2207 1907 1873 1571 1800 1690 1938 2518 1513 601 9 1414 5285 4 6621 49 757 461 1332 1148 1497 1920 1843 1916 1848 1690 1811 1781 1705 1755 1868 1776 1873 1994 1832 1849 1995 ]
C [ 1599 1456 1526 1492 1578 1738 1753 1526 1679 1493 1465 1403 1507 1515 1570 1528 1556 1592 1445 1520 880 993 992 79 4512 27 6687 7 6466 4319 829 1881 2030 1583 1685 1744 1572 1536 1687 1471 1497 1706 1475 1503 1533 1561 1595 1503 1593 1514 ]
G [ 1327 1340 1298 1343 1289 1267 1235 1332 1401 1320 1483 1485 1642 1315 1429 1234 1287 1308 1747 1544 1283 1101 677 1 592 301 0 65 171 207 204 1049 1197 1536 1105 1340 1316 1226 1250 1587 1617 1350 1334 1328 1251 1273 1221 1322 1390 1306 ]
T [ 1932 1889 1893 1871 1885 1836 1773 1775 1820 1901 1935 2027 1792 1656 1787 2058 2279 1993 1811 1691 2012 3086 4423 6604 175 1080 2 0 7 1410 5199 2431 2318 2077 1983 1766 1889 2083 2066 1824 1798 1932 2129 1994 2133 1986 1883 2036 1861 1878 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 0.00 -0.01 -0.02 0.01 0.03 -0.01 0.05 -0.00 -0.01 -0.01 0.00 -0.00 -0.00 0.00 ]
C [ 0.01 0.01 -0.00 0.00 0.01 0.00 0.03 -0.03 0.07 -0.04 0.05 0.02 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.00 0.01 -0.03 0.01 0.01 -0.02 0.03 0.01 0.01 -0.00 0.00 0.01 0.01 0.01 ]
T [ 0.00 0.00 0.00 0.01 0.02 0.05 -0.02 0.01 -0.01 -0.02 -0.02 0.01 0.02 0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6872

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4838

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2340

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2229

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1600

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1117

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 763

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 179

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 142

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 97

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 90

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 30

CWM

PFM

     

HCWM