Detailed information of deep learning profile BP001257.1

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This page shows detailed deep learning-derived predictions and motifs for TBX21 in GM12878 using a single trained BPNet model.

Model details

Name: TBX21
Model ID: BP001257.1
Cell line/tissue: GM12878
Class: T-Box factors
Family: TBrain-related factors
JASPAR ID: MA0690.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UL17  
Source: ENCSR739IHN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 -0.00 0.05 0.01 0.01 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.02 0.05 0.00 0.07 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.00 0.03 0.00 0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1878 1861 2036 1883 1986 2133 1994 2129 1932 1798 1824 2066 2083 1889 1766 1983 2077 2318 2431 5199 1410 7 0 2 1080 175 6604 4423 3086 2012 1691 1811 1993 2279 2058 1787 1656 1792 2027 1935 1901 1820 1775 1773 1836 1885 1871 1893 1889 1932 ]
C [ 1306 1390 1322 1221 1273 1251 1328 1334 1350 1617 1587 1250 1226 1316 1340 1105 1536 1197 1049 204 207 171 65 0 301 592 1 677 1101 1283 1544 1747 1308 1287 1234 1429 1315 1642 1485 1483 1320 1401 1332 1235 1267 1289 1343 1298 1340 1327 ]
G [ 1514 1593 1503 1595 1561 1533 1503 1475 1706 1497 1471 1687 1536 1572 1744 1685 1583 2030 1881 829 4319 6466 7 6687 27 4512 79 992 993 880 1520 1445 1592 1556 1528 1570 1515 1507 1403 1465 1493 1679 1526 1753 1738 1578 1492 1526 1456 1599 ]
T [ 1995 1849 1832 1994 1873 1776 1868 1755 1705 1781 1811 1690 1848 1916 1843 1920 1497 1148 1332 461 757 49 6621 4 5285 1414 9 601 1513 2518 1938 1690 1800 1571 1873 1907 2207 1752 1778 1810 1979 1793 2060 1932 1852 1941 1987 1976 2008 1835 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.01 0.02 0.01 -0.02 -0.02 -0.01 0.01 -0.02 0.05 0.02 0.01 0.00 0.00 0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.00 0.01 0.01 0.03 -0.02 0.01 0.01 -0.03 0.01 0.00 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 0.02 0.05 -0.04 0.07 -0.03 0.03 0.00 0.01 0.00 -0.00 0.01 0.01 ]
T [ 0.00 -0.00 -0.00 0.00 -0.01 -0.01 -0.00 0.05 -0.01 0.03 0.01 -0.02 -0.01 0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6872

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4838

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2340

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2229

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1600

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1117

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 763

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 179

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 142

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 97

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 90

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 30

CWM

PFM

     

HCWM