Detailed information of deep learning profile BP001255.1

  1. Home
  2. Deep Learning Profile > BP001255.1
This page shows detailed deep learning-derived predictions and motifs for ZNF257 in K562 using a single trained BPNet model.

Model details

Name: ZNF257
Model ID: BP001255.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1710.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y2Q1  
Source: ENCSR492FKD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 0.00 0.00 0.01 0.03 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.02 -0.00 0.02 0.03 0.00 0.00 0.00 0.02 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 509 473 508 468 476 427 452 494 455 428 480 568 575 394 538 595 62 1553 96 19 327 1329 1825 49 783 402 323 606 470 472 497 455 425 453 466 485 468 449 457 453 455 434 442 476 433 444 483 479 435 507 ]
C [ 485 517 537 470 471 515 500 526 519 557 463 469 360 503 548 208 63 158 37 4 1503 216 23 146 405 276 1128 422 330 408 414 455 483 476 464 484 467 464 504 435 461 522 496 492 559 496 496 462 476 458 ]
G [ 577 623 541 596 594 609 552 600 610 646 642 546 692 643 478 514 1735 33 1749 1912 25 394 57 1525 711 783 296 507 782 800 757 725 719 648 669 628 663 707 658 698 669 655 662 605 629 601 586 653 733 599 ]
T [ 393 351 378 430 423 413 460 344 380 333 379 381 337 424 400 647 104 220 82 29 109 25 59 244 65 503 217 429 382 284 296 329 337 387 365 367 366 344 345 378 379 353 364 391 343 423 399 370 320 400 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.00 0.00 -0.01 0.02 -0.01 -0.01 0.00 0.02 0.03 -0.02 0.01 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 -0.01 0.00 -0.00 -0.02 0.02 -0.01 -0.00 -0.01 0.00 -0.00 0.01 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.02 -0.02 0.02 0.03 -0.03 0.01 -0.01 0.02 0.00 0.00 -0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.00 0.00 0.00 -0.01 -0.01 0.00 -0.02 -0.01 0.00 -0.01 0.01 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1154

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 404

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 78

CWM

PFM

     

HCWM