Detailed information of deep learning profile BP001246.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF740 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF740
Model ID: BP001246.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
JASPAR ID: MA0753.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8NDX6  
Source: ENCSR755ZAY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.03 0.04 0.06 0.07 0.07 0.06 0.05 0.01 0.01 0.01 0.00 ]
G [ -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 587 601 594 607 585 591 575 589 539 578 548 580 522 596 695 495 574 542 262 570 0 9 3 12 1 1719 613 631 520 526 508 610 566 595 562 655 637 643 620 603 593 597 596 662 598 619 646 645 645 667 ]
C [ 1141 1106 1157 1159 1150 1139 1157 1179 1274 1201 1228 1239 1323 1349 1261 1498 1181 1209 2782 2413 3290 3280 3284 3275 3291 893 2021 1598 1671 1611 1448 1321 1267 1298 1321 1184 1263 1170 1178 1162 1127 1124 1199 1129 1103 1134 1063 1082 1088 1066 ]
G [ 934 908 894 864 879 917 876 855 868 852 874 817 809 749 776 762 795 1175 37 22 2 0 2 3 0 250 280 468 635 649 768 811 912 851 800 830 817 882 889 853 893 913 848 830 904 881 912 937 907 947 ]
T [ 630 677 647 662 678 645 684 669 611 661 642 656 638 598 560 537 742 366 211 287 0 3 3 2 0 430 378 595 466 506 568 550 547 548 609 623 575 597 605 674 679 658 649 671 687 658 671 628 652 612 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.03 -0.04 -0.04 -0.03 -0.02 -0.00 -0.00 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.03 0.04 0.06 0.07 0.07 0.06 0.05 0.03 0.02 0.01 0.01 0.01 ]
G [ -0.00 -0.00 -0.01 -0.00 -0.02 -0.03 -0.03 -0.03 -0.03 -0.03 -0.02 -0.01 -0.01 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.02 -0.03 -0.04 -0.04 -0.04 -0.03 -0.02 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 683

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 105

CWM

PFM

     

HCWM

1 profiles found for the same TF (ZNF740) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001245.1 ZNF740 ENCSR427XYP K562 Homo sapiens MA0753.3
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