Detailed information of deep learning profile BP001246.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF740 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF740
Model ID: BP001246.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
JASPAR ID: MA0753.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8NDX6  
Source: ENCSR755ZAY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.01 0.01 0.01 0.05 0.06 0.07 0.07 0.06 0.04 0.03 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 612 652 628 671 658 687 671 649 658 679 674 605 597 575 623 609 548 547 550 568 506 466 595 378 430 0 2 3 3 0 287 211 366 742 537 560 598 638 656 642 661 611 669 684 645 678 662 647 677 630 ]
C [ 947 907 937 912 881 904 830 848 913 893 853 889 882 817 830 800 851 912 811 768 649 635 468 280 250 0 3 2 0 2 22 37 1175 795 762 776 749 809 817 874 852 868 855 876 917 879 864 894 908 934 ]
G [ 1066 1088 1082 1063 1134 1103 1129 1199 1124 1127 1162 1178 1170 1263 1184 1321 1298 1267 1321 1448 1611 1671 1598 2021 893 3291 3275 3284 3280 3290 2413 2782 1209 1181 1498 1261 1349 1323 1239 1228 1201 1274 1179 1157 1139 1150 1159 1157 1106 1141 ]
T [ 667 645 645 646 619 598 662 596 597 593 603 620 643 637 655 562 595 566 610 508 526 520 631 613 1719 1 12 3 9 0 570 262 542 574 495 695 596 522 580 548 578 539 589 575 591 585 607 594 601 587 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.02 -0.03 -0.04 -0.04 -0.04 -0.03 -0.02 -0.01 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 -0.01 -0.01 -0.02 -0.03 -0.03 -0.03 -0.03 -0.03 -0.02 -0.00 -0.01 -0.00 -0.00 ]
G [ 0.01 0.01 0.01 0.02 0.03 0.05 0.06 0.07 0.07 0.06 0.04 0.03 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.00 -0.00 -0.02 -0.03 -0.04 -0.04 -0.03 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 683

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 105

CWM

PFM

     

HCWM

1 profiles found for the same TF (ZNF740) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001245.1 ZNF740 ENCSR427XYP K562 Homo sapiens MA0753.3
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